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Bacteriophage 44RR2.8t (bp441)
Gene : 44
DDBJ      :44           DNA polymerase accessory protein
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  49/915 : Eukaryota  194/199 : Viruses  11/175   --->[See Alignment]
c.37.1
:319 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->313 2chqA PDBj 7e-20 28.0 %
:RPS:PDB   14->221 2chgB PDBj 1e-17 27.4 %
:RPS:SCOP  14->229 1jr3A2  c.37.1.20 * 1e-27 22.3 %
:HMM:SCOP  7->244 1sxjB2 c.37.1.20 * 2.7e-30 25.8 %
:RPS:PFM   45->167 PF00004 * AAA 4e-07 35.6 %
:HMM:PFM   47->156 PF00004 * AAA 3.8e-16 25.7 105/130  
:HMM:PFM   147->262 PF06120 * Phage_HK97_TLTM 6e-05 19.8 106/301  
:BLT:SWISS 1->316 DPA44_BPT4 e-106 58.9 %

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81358.1 GT:GENE 44 GT:PRODUCT DNA polymerase accessory protein GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(23702..24661) GB:FROM 23702 GB:TO 24661 GB:DIRECTION - GB:GENE 44 GB:PRODUCT DNA polymerase accessory protein GB:NOTE clamp loader subunit; similar to T4 accession NP_049665.1; gp44 GB:PROTEIN_ID AAQ81358.1 GB:DB_XREF GI:34732820 GB:GENE:GENE 44 LENGTH 319 SQ:AASEQ MLTVNHGEFMFENKYRPGNIDECILPEHDKKIFKAIVKSGRIPNIILHSPSPGTGKTTVARALVAEIDAEFLFVNGADAKIDFVRDVMTPFASSKTFCKGGKVIIVDEFDRAGLADSQRHLRSFMEAHSKNCTFIITANDLGGIIPALQSRCRVIQFGKADQSDKINMMKQMIVRAEEICAAENIEVEDRKVIAALVKKNFPDFRKTVNEMDFYASEGKIDSGILSLVLNTRNDIDQVVEAIKARDIKNLRAMATQYTTDYSGFVSRLANTLYPLVNGPSKIRMYEIIGENNQLYGQAANIEIHVQYMFVQLSVEMVFA GT:EXON 1|1-319:0| BL:SWS:NREP 1 BL:SWS:REP 1->316|DPA44_BPT4|e-106|58.9|316/319| BL:PDB:NREP 1 BL:PDB:REP 14->313|2chqA|7e-20|28.0|289/313| RP:PDB:NREP 1 RP:PDB:REP 14->221|2chgB|1e-17|27.4|201/222| RP:PFM:NREP 1 RP:PFM:REP 45->167|PF00004|4e-07|35.6|104/123|AAA| HM:PFM:NREP 2 HM:PFM:REP 47->156|PF00004|3.8e-16|25.7|105/130|AAA| HM:PFM:REP 147->262|PF06120|6e-05|19.8|106/301|Phage_HK97_TLTM| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF00004|IPR003959| RP:SCP:NREP 1 RP:SCP:REP 14->229|1jr3A2|1e-27|22.3|206/240|c.37.1.20| HM:SCP:REP 7->244|1sxjB2|2.7e-30|25.8|213/224|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 743 OP:NHOMOORG 314 OP:PATTERN 111111111111111123223221111111121221-1111111-211212221---1-1-111-211 ---------------------------------------------------------------------------------------------111------11--1--1----------------------------------------------------------------------------------------------------1-------1---11------------------------11111--------111----------1--------------------------------------------------11----------1------------1--1--------1-1---------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------11-11-----1-------1-------------------1---------------------------------------------------------------------------------------------------------------------------------------------1-------------------11--11-----1-----------------------------------------------------------------------------------1------------------1---111-1--- 3323332-21113323342343323323333233332333333223333333332323333343333333332333333333332133-3633333433323332233436353331212-23344231AC5-323222143252122-132132344223333332322733323333b3333333334333333332 ---1-1-------------1---11----------111-1----------------------------------------------------------------------------------------------------------------------------------3--2- STR:NPRED 310 STR:RPRED 97.2 SQ:SECSTR ######ccccTTTHTccccGGGccccHHHHHHHHHHHHTTcccEEEEEcccTTccHHHHHHHHHHHHHGGGTGGGEEEEETTcTTcHHHHHHHHHHHHTccEEEEEETGGcGccHHHHHHHHHHHHHHTTTEEEEEEEccGGGccHHHHHTEEEEEcccccHHHHHHHHHHHHHHHTHHHHTcEEcHHHHHHHHHHHTTcHHHHHHHHHHHHTTccEEcHHcHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHTcccTTHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHTT### DISOP:02AL 1-4| PSIPRED ccccccccccHHHHHccccHHHHcccHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHHccccccEEEEEEccHHHccHHHHHHEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHEEc //