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Bacteriophage 44RR2.8t (bp441)
Gene : 46
DDBJ      :46           recombination endonuclease subunit
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  13/915 : Eukaryota  1/199 : Viruses  10/175   --->[See Alignment]
c.37.1f.5.1
:570 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->97 1ii8A PDBj 2e-04 32.1 %
:RPS:PDB   14->54 3d3kA PDBj 8e-05 12.2 %
:RPS:PDB   323->534 2dhhA PDBj 2e-05 12.9 %
:RPS:SCOP  13->103 1f2t.1  c.37.1.12 * 8e-13 27.3 %
:RPS:SCOP  317->395 1wp1A  f.5.1.1 * 7e-05 22.7 %
:RPS:SCOP  381->539 1w1wA  c.37.1.12 * 8e-06 16.2 %
:HMM:SCOP  9->555 1ii8.1 c.37.1.12 * 6.6e-30 19.6 %
:HMM:PFM   14->79 PF02463 * SMC_N 8.7e-08 29.2 65/220  
:HMM:PFM   384->555 PF02463 * SMC_N 2.4e-05 23.1 117/220  
:HMM:PFM   179->214 PF10018 * Med4 0.00012 33.3 36/190  
:HMM:PFM   323->408 PF00769 * ERM 7.7e-05 20.5 83/245  
:BLT:SWISS 7->562 EXO2_BPR69 e-141 46.2 %
:PROS 474->488|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81362.1 GT:GENE 46 GT:PRODUCT recombination endonuclease subunit GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(26052..27764) GB:FROM 26052 GB:TO 27764 GB:DIRECTION - GB:GENE 46 GB:PRODUCT recombination endonuclease subunit GB:NOTE gp46/gp47 subunit required for recombination and host-DNA degradation; similar to T4 accession NP_049669.1; gp46 GB:PROTEIN_ID AAQ81362.1 GB:DB_XREF GI:34732824 GB:GENE:GENE 46 LENGTH 570 SQ:AASEQ MIDIKKKQLDFIRVRYKNIMSVGDEPIDLTLNEYAKTLCTGKNGAGKSTMLEAIYFALFGKPFRDITKNQLINENTGKNMLVELWLEYEEKVYHITRGIKPNKFAITCDGAQVDAAASIKDFQAYFEEMIGMNATSFKQIVVLGTAGYTPFMQLKAPERRKLVEDLLEVSVLAQMDKLNKARIKELNQEIASVDVTINHINTQLKTYHDHQNNSNASNDAAVADHQAVFEEARDKAKQIKSIIDSLTEQLTNFEMPESPANDLGKFTMARAKAAAQKEQFAGIAHMHEDGGVCPTCMQQFDDPDLLTKLHDKMSVIQGQLDKADDRIEELNQQMVEYNEATVRFRDVQTQLNNEKQSISLYVNQAKAAKAAIERLQAARPDYTGEITKLNDELVAKINTKSEIEREKHQRSMISDLLKDSGIKAVIMARYIPYFNNRIAHYLEIMEADFGFTLDAEFKEVIKSAGRSTFSYNSFSQGEKARIDMAVMFAWRDLASEVSGVDVNALFMDEVFDGPSDTDAQGAVFSIIDKMKANVLIISHGDHDPQNFDRHVKMSKLGRTSVMEEVIFNVL GT:EXON 1|1-570:0| BL:SWS:NREP 1 BL:SWS:REP 7->562|EXO2_BPR69|e-141|46.2|556/562| PROS 474->488|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 212->224|nnsnasndaavad| BL:PDB:NREP 1 BL:PDB:REP 13->97|1ii8A|2e-04|32.1|81/195| RP:PDB:NREP 2 RP:PDB:REP 14->54|3d3kA|8e-05|12.2|41/233| RP:PDB:REP 323->534|2dhhA|2e-05|12.9|201/1022| HM:PFM:NREP 4 HM:PFM:REP 14->79|PF02463|8.7e-08|29.2|65/220|SMC_N| HM:PFM:REP 384->555|PF02463|2.4e-05|23.1|117/220|SMC_N| HM:PFM:REP 179->214|PF10018|0.00012|33.3|36/190|Med4| HM:PFM:REP 323->408|PF00769|7.7e-05|20.5|83/245|ERM| RP:SCP:NREP 3 RP:SCP:REP 13->103|1f2t.1|8e-13|27.3|88/288|c.37.1.12| RP:SCP:REP 317->395|1wp1A|7e-05|22.7|75/456|f.5.1.1| RP:SCP:REP 381->539|1w1wA|8e-06|16.2|152/274|c.37.1.12| HM:SCP:REP 9->555|1ii8.1|6.6e-30|19.6|336/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 26 OP:NHOMOORG 26 OP:PATTERN ------------------------------11------------------------------------ ------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------1------------1--------------------1-11-------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------1-----------------------1----------------------------------------------------------------------------------------------------------1-----1---- --------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------- ---1-1-1-----------1---11----------111-1--------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 402 STR:RPRED 70.5 SQ:SECSTR ccccccccccccEcEEEcccHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHTccHHTcccccTTcccccTTcccccEEEEEEEEEccccEEEEEEEEEETTccEEEEETTEEEcHHHHHHHTTTccTTTTcccEEEHHHHHHHHTccHHHHHHHHHHHHHHHTccEEEcccEEEcTTcccccGGGc##################################################################################################################################HHHHHHHHHHHHHHHHHTcccTTcccEEEcccTTcccccccEEEEETHHHHHHHHHHHHHHccGGGccccEEcccccEEccccEEcccHHHHHHTTccHHHHHHHHHHHHHcccccEEEccccEEEccccccGGGcccTTTGGEEEcTTccEEEGGGcccccccEEccEEEEETTEEEEEEEE#########cccccccHHHHHHHHHHHHHTccTTcEEEEcTH############################# DISOP:02AL 1-6,63-74,195-197,199-214,312-328,349-358| PSIPRED cccccccEEEEEEEEEEcccccccEEEEEEEccccEEEEEccccccHHHHHHHHHHHHcccccccccHHHHHHccccccEEEEEEEEEccEEEEEEEEEEcccEEEEEccccccccccHHHHHHHHHHHHcccHHHccEEEEEEHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHHcccEEEEEcccccHHccccEEEEEEEccEEEEEEEEEccc //