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Bacteriophage 44RR2.8t (bp441)
Gene : AAQ81417.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  11/915 : Eukaryota  0/199 : Viruses  3/175   --->[See Alignment]
d.43.2
:307 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   66->221 3bk6C PDBj 4e-07 19.2 %
:RPS:SCOP  63->195 1winA  d.43.2.1 * 4e-10 10.9 %
:HMM:SCOP  61->204 1winA_ d.43.2.1 * 2.8e-06 17.1 %
:HMM:PFM   33->214 PF01145 * Band_7 3.6e-19 26.7 165/179  
:BLT:SWISS 71->282 HMMR_MOUSE 1e-05 23.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81417.1 GT:GENE AAQ81417.1 GT:PRODUCT hypothetical protein GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(55269..56192) GB:FROM 55269 GB:TO 56192 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE matches Pfam Band_7 SPFH domain E GB:PROTEIN_ID AAQ81417.1 GB:DB_XREF GI:34732879 LENGTH 307 SQ:AASEQ MRNQSKMPKLTKKQTLIGAAVAGAIIIAANVFAVVDDGSVATTTFLGKVSPNIMQPGLNVINPLASVDTYSTRDLKMEFTNVQVPSQDKLKTSVDITLMLRFDGDKAQAVRINGGTERQAIDKYVAKKFESTVRESGKNIKKAQDLFGDATTQSMLQELIKSEVNEYSKPFGYEVVEVFLQEITLPKLIQDQVEQTKIREEAVNQAQADLDKAEKVAQQQVKTAEAAREAREQNAVANERDADAKLYAAGKEAEANSLLQKTITPEMIKWRQLEVEMIRANKYQGGVPQTVVGAGYDGQMLMDMRSK GT:EXON 1|1-307:0| BL:SWS:NREP 1 BL:SWS:REP 71->282|HMMR_MOUSE|1e-05|23.7|207/794| TM:NTM 1 TM:REGION 14->36| SEG 17->35|igaavagaiiiaanvfavv| SEG 224->240|aeaareareqnavaner| RP:PDB:NREP 1 RP:PDB:REP 66->221|3bk6C|4e-07|19.2|146/160| HM:PFM:NREP 1 HM:PFM:REP 33->214|PF01145|3.6e-19|26.7|165/179|Band_7| RP:SCP:NREP 1 RP:SCP:REP 63->195|1winA|4e-10|10.9|129/143|d.43.2.1| HM:SCP:REP 61->204|1winA_|2.8e-06|17.1|140/0|d.43.2.1|1/1|Band 7/SPFH domain| OP:NHOMO 14 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------1---------------------------------------1-----1--11-----------11-11------------1----1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------11---------------------------------------------------------------------------------------------------------------------------1-------------- STR:NPRED 146 STR:RPRED 47.6 SQ:SECSTR #################################################################cccccccccEEEEEEEEEEEcTTccEEEEEEEEEEEEc#cHHHHH#####HccccHHHHHHHHHHHHHHHHHHH#ccHHHHHHc###HHHHHHHHHHHHHHHTGGGTEEEEEEEEEEEEccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH###################################################################################### DISOP:02AL 1-11,192-209,212-212,214-240,306-308| PSIPRED ccccHHccHHHHHHHHHHHHHHHHHHHHEHEEEEEccccEEEEEEEcccccEEcccccEEEEcccEEEEEEEEEEEEEEcccEEccccccEEEEEEEEEEEEcHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccEEEEccccc //