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Bacteriophage 44RR2.8t (bp441)
Gene : AAQ81429.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  359/915 : Eukaryota  177/199 : Viruses  4/175   --->[See Alignment]
c.7.1
:570 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->552 2wghB PDBj 2e-32 30.6 %
:RPS:PDB   7->552 2cvtA PDBj 2e-86 26.9 %
:RPS:SCOP  36->569 1l1lA  c.7.1.4 * 5e-69 14.7 %
:HMM:SCOP  96->555 1peqA2 c.7.1.2 * 5.2e-78 33.9 %
:RPS:PFM   44->91 PF00317 * Ribonuc_red_lgN 5e-04 43.8 %
:RPS:PFM   98->559 PF02867 * Ribonuc_red_lgC 2e-28 34.2 %
:HMM:PFM   98->188 PF02867 * Ribonuc_red_lgC 1.1e-12 33.0 91/533  
:HMM:PFM   221->390 PF02867 * Ribonuc_red_lgC 3.6e-22 28.2 163/533  
:HMM:PFM   392->549 PF02867 * Ribonuc_red_lgC 7e-32 34.4 151/533  
:HMM:PFM   27->94 PF00317 * Ribonuc_red_lgN 4.7e-11 30.9 68/83  
:BLT:SWISS 225->570 RIR1_IIV3 2e-59 39.1 %

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81429.1 GT:GENE AAQ81429.1 GT:PRODUCT hypothetical protein GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(60879..62591) GB:FROM 60879 GB:TO 62591 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE similar to eukaryotic NDP reductases and T4 nrdA accession NP_049845.1 GB:PROTEIN_ID AAQ81429.1 GB:DB_XREF GI:34732891 LENGTH 570 SQ:AASEQ MKAQSKFESVSAERKYLQSIGEIPEFYTTQGWSMFKKNYQYKGETVRGAFRRVASTLAKHDIRPEAEERYFDLLWSGKLAMATPVFCNTGTDRGMPVSCAGSYVGDSVLDFYEGQTEVAMLAKNGFGTASYLGDIRPRGSDISTSHNKADGLVPVFDNFVNTKTKVAAAGRRGEWAGYVDFSHGDFWELQGYVLKNPASAHVGWVFEKEDYEKLKARDPEYMARWNELMYMRARTGKGYMWKNWIANELAPQAIKNSGIPIRSSQLCTEIALPSDDMHTFTCILSSLNVSLWDEITADDIKWSVRFLDSVCSEFLAKAKELSYDTLHKAIRFTEKARALGLGTLGFHTYLQMNDIAFESGAAHILNNQLYAEIKKAAEEGSRELAEEYGEPEWCKGTGMRNATLITIAPNMSSALLAGGVSQGVEPLVCNSFIQQSNAGDFVRSNPVLAKVLKDRLTDKEIQELMEDIATYHNGSVQHLDILTDHEKSVFKTAYEIDQHAIIRLASARQRHIDQAQSINLFFSADEKESVIASVHRAFMDDPRLKSLYYLRSERGVKASSGKSDCLACEG GT:EXON 1|1-570:0| BL:SWS:NREP 1 BL:SWS:REP 225->570|RIR1_IIV3|2e-59|39.1|338/630| BL:PDB:NREP 1 BL:PDB:REP 1->552|2wghB|2e-32|30.6|529/657| RP:PDB:NREP 1 RP:PDB:REP 7->552|2cvtA|2e-86|26.9|528/637| RP:PFM:NREP 2 RP:PFM:REP 44->91|PF00317|5e-04|43.8|48/80|Ribonuc_red_lgN| RP:PFM:REP 98->559|PF02867|2e-28|34.2|415/506|Ribonuc_red_lgC| HM:PFM:NREP 4 HM:PFM:REP 98->188|PF02867|1.1e-12|33.0|91/533|Ribonuc_red_lgC| HM:PFM:REP 221->390|PF02867|3.6e-22|28.2|163/533|Ribonuc_red_lgC| HM:PFM:REP 392->549|PF02867|7e-32|34.4|151/533|Ribonuc_red_lgC| HM:PFM:REP 27->94|PF00317|4.7e-11|30.9|68/83|Ribonuc_red_lgN| GO:PFM:NREP 7 GO:PFM GO:0004748|"GO:ribonucleoside-diphosphate reductase activity"|PF00317|IPR013509| GO:PFM GO:0005524|"GO:ATP binding"|PF00317|IPR013509| GO:PFM GO:0006260|"GO:DNA replication"|PF00317|IPR013509| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00317|IPR013509| GO:PFM GO:0004748|"GO:ribonucleoside-diphosphate reductase activity"|PF02867|IPR000788| GO:PFM GO:0005971|"GO:ribonucleoside-diphosphate reductase complex"|PF02867|IPR000788| GO:PFM GO:0006260|"GO:DNA replication"|PF02867|IPR000788| RP:SCP:NREP 1 RP:SCP:REP 36->569|1l1lA|5e-69|14.7|505/717|c.7.1.4| HM:SCP:REP 96->555|1peqA2|5.2e-78|33.9|413/525|c.7.1.2|1/1|PFL-like glycyl radical enzymes| OP:NHOMO 653 OP:NHOMOORG 561 OP:PATTERN ------1----------------1-111-111--1--------1111-1-111--------1111--- 1---1-----1---1--11-1----211111-1111----1------1-111------1111-11111111-----------1-112-------1-1--11211121111111111111111111-----------1----222121------------------------------------1--1111-11-----------------1-------111-111111111-----------------------------------------------------------------------------------------------1111-11111111---1---1-1112---111--1-11111---1--21-1111-------1--111-1-----------------------1-11--------------111----------1111111111111-1111111111111111111111111111111111111111111111111111111111111111111111112111111111111111-1-1111-------111---1-1--11111-1111111111111----1111------------1------------11----11--------------------------111-1----------1-------------------------------------------------------------------------------1-11111111111111-111-1------1---1111111---1111111111111111111111111111------------1--12111111111111----------------------------------------------1--111-1111-- 11--111-311-11111111111111111111111111111-1111111111111111111122222212121222212221222211-11111111111111423111122322111-1--111--11291-11211--1-111111--1--21-111-343111-111111231111H1111131241111121113 -----------------------------------1--------------------------------------------------------------------------------------------------------------------------------------11-1- STR:NPRED 553 STR:RPRED 97.0 SQ:SECSTR cccHHHHHHHHTTHHHHHHHGGGGGcccHHHHHHHHHHTccccccHHHHHHHHHHHHcTTcccHHHHHHHHHHHHTTcEEEcHHHHHHTTcccccccccEEEcccccHHHHHHHHHHHHHTTTccccEEEEcTTcccTTcccccccccccccHHHHHHHHHHHHHTTTTTccccEEEEEcTTcTTHHHHcEEccccTTTcTcHHHHHHHccccEEHHHccccEHHHHHHHHHHHHcccEEEEHHHHHHTcTTGGTTTccccccccccTTccccccTTccEEccEEEEETTTTEEccccEEcHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccEEEEEcHHHHHHHTTccTTcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcTTcTccHHHHTTccccccccHHHTHHHHHHHHccccccccccccccccccccHHHHHHHHHcccccccTTcccHHHHccccccccTTccHHHHHHcccTTTccHHHHHHHHHHHGGGcccccccccccccccTTHHHHHHHHHHHHHTTcccccccccc################# DISOP:02AL 1-1| PSIPRED cccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccEEccccEEEccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEccHHHHHHHHHHcccccccccccEEEccHHHHHHHccccHHHHHHHHHHHHHHHccccEEEEEcHHHHcccccHHccccEEEcccccccccccccccccHHEEHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccEEEcccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccHHHEEEEcccccHHHHHcccccccccccccEEEEEcccccccEEcHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHccc //