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Bacteriophage 44RR2.8t (bp441)
Gene : dda
DDBJ      :dda          DNA helicase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  17/915 : Eukaryota  0/199 : Viruses  6/175   --->[See Alignment]
c.37.1
:439 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   59->194 3gplA PDBj 5e-05 27.8 %
:BLT:PDB   390->436 1w36D PDBj 1e-05 53.5 %
:RPS:PDB   57->147 3e1sA PDBj 2e-08 31.0 %
:RPS:PDB   372->436 3dmnA PDBj 9e-05 12.7 %
:RPS:SCOP  2->172 1w36D1  c.37.1.19 * 4e-10 21.6 %
:RPS:SCOP  379->439 1w36D2  c.37.1.19 * 2e-05 35.1 %
:HMM:SCOP  4->178 1w36D1 c.37.1.19 * 9.5e-21 23.2 %
:HMM:SCOP  125->439 1w36D2 c.37.1.19 * 2.4e-29 28.6 %
:HMM:PFM   386->438 PF01443 * Viral_helicase1 0.00015 27.1 48/226  
:HMM:PFM   18->72 PF02562 * PhoH 1.1e-06 32.7 55/205  
:BLT:SWISS 2->439 DDA_BPT4 e-107 49.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81341.1 GT:GENE dda GT:PRODUCT DNA helicase GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(12251..13570) GB:FROM 12251 GB:TO 13570 GB:DIRECTION - GB:GENE dda GB:PRODUCT DNA helicase GB:NOTE DNA-dependent ATPase; DNA helicase; similar to T4 accession NP_049632.1; T4 gene synonym: sud GB:PROTEIN_ID AAQ81341.1 GB:DB_XREF GI:34732803 GB:GENE:GENE dda LENGTH 439 SQ:AASEQ MLTYDDLTNGQKLAIDGAMDAISTKRHITIRGPAGTGKTTLTKFLLDRLFQTGQQGIVLAAPTHQAKKELSKHALRKAYTIQSLLKINPSTLEENQIFEQKGTPDFSKIRVLICDEVSFYTRKLFNILMKTVPSHCVIIGIGDKAQIRGVSEDNETHELSPFFTDDRFSQVELDEVKRHQGPIIEVATDIRNGKWIYEKLDEHGNGVKQYHSVKDFLGVYFNRTKKPEDLFENRIMAYTNASVDKLNAVIRKKLYGSDVAPFLPGEILVMQEPLMFEIDVGGQTLKEVIFSNGQNVQILNVKPSRKKLVAKNVGEIEVEYIMLECETHDEDEDDYKRAWFSVIADDNTAQAISEFLSIIADKYRSRAVFPAWKDFWAIKNTFTKVRPLGAMTFHKSQGSTFKNAYLFTPCLHSYCRDPDVAQELIYVGNTRARENVGFV GT:EXON 1|1-439:0| BL:SWS:NREP 1 BL:SWS:REP 2->439|DDA_BPT4|e-107|49.0|433/439| SEG 35->46|gtgkttltkfll| BL:PDB:NREP 2 BL:PDB:REP 59->194|3gplA|5e-05|27.8|126/516| BL:PDB:REP 390->436|1w36D|1e-05|53.5|43/538| RP:PDB:NREP 2 RP:PDB:REP 57->147|3e1sA|2e-08|31.0|84/517| RP:PDB:REP 372->436|3dmnA|9e-05|12.7|63/159| HM:PFM:NREP 2 HM:PFM:REP 386->438|PF01443|0.00015|27.1|48/226|Viral_helicase1| HM:PFM:REP 18->72|PF02562|1.1e-06|32.7|55/205|PhoH| RP:SCP:NREP 2 RP:SCP:REP 2->172|1w36D1|4e-10|21.6|167/348|c.37.1.19| RP:SCP:REP 379->439|1w36D2|2e-05|35.1|57/190|c.37.1.19| HM:SCP:REP 4->178|1w36D1|9.5e-21|23.2|168/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 125->439|1w36D2|2.4e-29|28.6|213/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 23 OP:NHOMOORG 23 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------111---------11--------------1-----1---------------------------------------------------------------------------------------------------------------------------------------------------111--1------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---11-1---------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1---------------1---------------111-1--------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 200 STR:RPRED 45.6 SQ:SECSTR ########################################################EEEEEccHHHHHHHHHHHTccEEEHHHHTTEETTEEcccccccccTccccccccEEEEccGGGccHHHHHHHHTTccTTcEEEEEEcTTccGGTccccHHHHHHHHccEEEccccccccTT###cHHHHHHHHHTTTc#################################################################################################################################################################################TccEEEccccccccccEEEEEGGGcTTccEEEEEEEcETccTTTcccGGGHHHHHHHHTTEEEEE### PSIPRED cccHHHccHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccccHHHHHHHHcccccccccHHHHHHcccccHHHccEEEEEccccccHHHHHHHHHHcccccEEEEEccHHHccccccccHHHHHHHHcccccccEEEEEEEEEcccHHHHHHHHHccccccHHHHHHcccccccccHHHHHHHHHHHHcccccccHHHEEEcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHccHHHcccHHHHHHHHccccEEEEEcccccccccHHccccccEEEEEEEEccccccccccccccEEEEEccccHHHHHHHHHHHHHHccccccccccHHHHHHcHHHHccccEEEEEEEEccccccccEEEEEccccccccccHHHHHHHHEEEEEEccEEEEEc //