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Bacteriophage 44RR2.8t (bp441)
Gene : rIIA
DDBJ      :rIIA         rIIA protector from prophage-induced early lysis
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  7/175   --->[See Alignment]
c.1.8d.122.1
:705 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->128 2zbkB PDBj 5e-04 30.7 %
:RPS:PDB   46->188 1ah8A PDBj 5e-06 19.6 %
:RPS:SCOP  27->165 1a4hA  d.122.1.1 * 1e-10 23.7 %
:RPS:SCOP  469->534 1fcqA  c.1.8.9 * 4e-12 24.6 %
:HMM:SCOP  44->182 1mu5A3 d.122.1.2 * 4.3e-13 28.1 %
:RPS:PFM   46->144 PF02518 * HATPase_c 3e-05 34.4 %
:HMM:PFM   41->145 PF02518 * HATPase_c 2.8e-11 27.0 100/111  
:HMM:PFM   352->470 PF01786 * AOX 0.001 25.4 63/207  
:BLT:SWISS 5->558 VR2A_BPT4 1e-48 30.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81320.1 GT:GENE rIIA GT:PRODUCT rIIA protector from prophage-induced early lysis GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(1..2118) GB:FROM 1 GB:TO 2118 GB:DIRECTION - GB:GENE rIIA GB:PRODUCT rIIA protector from prophage-induced early lysis GB:NOTE similar to T4 accession NP_049616.1; membrane integrity protector GB:PROTEIN_ID AAQ81320.1 GB:DB_XREF GI:34732782 GB:GENE:GENE rIIA LENGTH 705 SQ:AASEQ MIMSSNEDDAMFGNAPKKRTGFKITAGKKAFRVLSDKLYKDKAEAVLRELSCNAVDIHCEMGKAHIPFDVTLPTSIYPWFVIRDYGSGLSPEQIDDIFTVYFASTKDESNDSIGGFGLGCKSPFAYSETGGGFTVKSYQNGTCTVYNMYMDDGEPFSTPMSTTATTEADGLEIQVPIPAHEHARWKILAAKVYRAFDRCKPNITNGDIISIQEFPDEEEFFFNDDFGRSGQAFAIIGGVVYPIPERLISSDMVFKYSGRAAYMKFPIGELDIAPSREELSLDKQTEDYLVERMKKFSQSFANTVKKEFEGITDKRDAAIKTKKYNSYVVNAIADLEIGGELIGSIVKRYTDMSKLSEIPVYSYRNGSLKRQFTRSGYSWRTSMIDSQSVFGLERRKVHVLINDTGEGVPNMVKAYHNHINNSIPVVVLDKTHKLKKSEYAAFGKKISAICEKFEPHERHILKFSEMVDIRKAYTIKKRKDAGPKPVKPNVRRVYIDECDLRQVELLCLSTNEIRELEGVGIISYGDTYDRISLKPSGNMNRHAIDSLFAQGVEEVYIIENGKRSAAMKSNLQCGFMWMYEKLMENVEQFDVLDGECPYVNDEDLGTALRLKKFNLFDVEITRVFDKQNDDHLAEIVDWIEGNNPAFQAYHDMKAKIHDINVEYFERFTDAINKIQSKYPLLYAVAMSDIELTPEIMQDIEFIRAR GT:EXON 1|1-705:0| BL:SWS:NREP 1 BL:SWS:REP 5->558|VR2A_BPT4|1e-48|30.8|542/725| SEG 213->226|efpdeeefffnddf| BL:PDB:NREP 1 BL:PDB:REP 38->128|2zbkB|5e-04|30.7|88/506| RP:PDB:NREP 1 RP:PDB:REP 46->188|1ah8A|5e-06|19.6|138/215| RP:PFM:NREP 1 RP:PFM:REP 46->144|PF02518|3e-05|34.4|90/112|HATPase_c| HM:PFM:NREP 2 HM:PFM:REP 41->145|PF02518|2.8e-11|27.0|100/111|HATPase_c| HM:PFM:REP 352->470|PF01786|0.001|25.4|63/207|AOX| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 2 RP:SCP:REP 27->165|1a4hA|1e-10|23.7|135/214|d.122.1.1| RP:SCP:REP 469->534|1fcqA|4e-12|24.6|65/314|c.1.8.9| HM:SCP:REP 44->182|1mu5A3|4.3e-13|28.1|139/0|d.122.1.2|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 7 OP:NHOMOORG 7 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1---------------1---------------111-1----------------------------------------------------------------------------------------------------------------------------1---------- STR:NPRED 163 STR:RPRED 23.1 SQ:SECSTR #####################################HcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGGGccGTEEEEEEccccccHHHHHHHHHTTTHHHHcccHHHHHHHHHHTTccGGGGGGTcGGGGGGGTEEEEEEEEEcTTccEEEccccEEEEEEcccccccccEEEEEEEEcTTcGHHHcHHHHHHTT######################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-1,3-4,13-13,15-18,475-489| PSIPRED cEEccccccEEEEccccccEEEEEEEcHHHHHHHHHHccccccEEEEEEHHHHHHHHHHHccccccEEEEEEccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHEEEEEEEEEEEEEEEEccccEEEEEEEEccccEEEEEccccccccccccEEEEEEcHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHEEccccccccccEEEEcccEEEEccHHHHccEEEEEEEEcEEEEEEEccHHcccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHccccccccccEEEEEcccccccEEEEcccccccccccccEEEEcccccEEEEEcccccHHHHHHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHHcccccEEEEEHHHHHHHHHcccccEEEcccccccccEEEEEEEEcccEEEEEEEEEEHHHccccccEEEEEEcccccEEEEcccccccccHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHcccEEEEEccccEEEEEEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHcc //