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Bacteriophage 44RR2.8t (bp441)
Gene : rIIB
DDBJ      :rIIB         protector from prophage-induced early lysis
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  7/175   --->[See Alignment]
:377 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   52->138 104mA PDBj 8e-04 11.7 %
:RPS:PFM   15->48 PF04218 * CENP-B_N 6e-04 51.5 %
:HMM:PFM   12->59 PF08765 * Mor 9.1e-05 30.4 46/108  
:BLT:SWISS 7->48 VR2B_BPT4 1e-05 50.0 %
:BLT:SWISS 105->372 VR2B_BPT4 1e-62 44.8 %

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81570.1 GT:GENE rIIB GT:PRODUCT protector from prophage-induced early lysis GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(172433..173566) GB:FROM 172433 GB:TO 173566 GB:DIRECTION - GB:GENE rIIB GB:PRODUCT protector from prophage-induced early lysis GB:FUNCTION membrane integrity protector GB:NOTE similar to T4 accession NP_049889.1; rIIB GB:PROTEIN_ID AAQ81570.1 GB:DB_XREF GI:34733033 GB:GENE:GENE rIIB LENGTH 377 SQ:AASEQ MAKLKIVKCFDDVTKLQIFKKYEAGNISQGYLASEHGVSVDTIARVLKEVRTWPIAASQVVPENPTDEEIAAHFYSSTENTFEDTGRHFGITGLEAHNAVTRRNQEITKAQEKAKGLIAQADVAIKHLDEVIEADKELECTWMANSKFLSVTIGSETYNASGDHPQFMEIIGLLRAEKYDEAMELLNIKRGLERYISGDLVIEGGTLRYKDLVIDSGLTRRIVSRMQSGEPFLPLIAFFENLMDNPSRRAVYQLYDFLEHNDIEITDDGHFIAWKRVNHSFKDMYTGKFDNSPGTVVKINRFQVDEDPNTTCSHGLHVAAKSYIPHYGGGSGKVIACKVNPADVVAIPTDYQNAKMRCAGYEVLYEVTEDFKEMKHY GT:EXON 1|1-377:0| BL:SWS:NREP 2 BL:SWS:REP 7->48|VR2B_BPT4|1e-05|50.0|42/312| BL:SWS:REP 105->372|VR2B_BPT4|1e-62|44.8|268/312| RP:PDB:NREP 1 RP:PDB:REP 52->138|104mA|8e-04|11.7|77/153| RP:PFM:NREP 1 RP:PFM:REP 15->48|PF04218|6e-04|51.5|33/52|CENP-B_N| HM:PFM:NREP 1 HM:PFM:REP 12->59|PF08765|9.1e-05|30.4|46/108|Mor| GO:PFM:NREP 2 GO:PFM GO:0000775|"GO:chromosome, centromeric region"|PF04218|IPR006695| GO:PFM GO:0003677|"GO:DNA binding"|PF04218|IPR006695| OP:NHOMO 7 OP:NHOMOORG 7 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1---------------1---------------111-1----------------------------------------------------------------------------------------------------------------------------1---------- STR:NPRED 77 STR:RPRED 20.4 SQ:SECSTR ###################################################HHHHHGGGH#######HHHHHHHHHHHHHHcGGGGGGcTTTTTcccHHHHHHcHHHHHH###HHHHHHHHHHHHTTTTccHHHHHHH############################################################################################################################################################################################################################################### DISOP:02AL 1-2,97-119,374-378| PSIPRED ccHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHHcHHHHHHHHHHHHHccHHHHHccccccccHHHcccccccccccccHHHHHHHccccccccccccEEEEccccEEEEEEccEEEEcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEccEEEEEEEEEcccHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccEEEcccccEEEEEEEccccEEEcccccccccccEEEEEHHHccccccccHHHcccHHHHccccccccccccEEEEEEcHHHEEEccccccccEEEHHHHHHHHHHHHHHHHHHcc //