[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Bacteriophage 44RR2.8t (bp441)
Gene : vs.6
DDBJ      :vs.6         Vs.6
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  256/915 : Eukaryota  8/199 : Viruses  6/175   --->[See Alignment]
c.7.1
:122 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   59->122 1mzoA PDBj 9e-26 78.1 %
:RPS:PDB   54->122 1cm5A PDBj 1e-21 72.5 %
:RPS:SCOP  31->120 1r8wA  c.7.1.1 * 7e-26 32.2 %
:HMM:SCOP  62->122 1cm5A_ c.7.1.1 * 1.4e-22 50.8 %
:RPS:PFM   20->103 PF01228 * Gly_radical 5e-17 56.0 %
:HMM:PFM   24->103 PF01228 * Gly_radical 1.6e-24 46.8 77/106  
:BLT:SWISS 1->122 GRCA_VIBHB 1e-34 58.2 %
:PROS 92->100|PS00850|GLY_RADICAL_1

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81437.1 GT:GENE vs.6 GT:PRODUCT Vs.6 GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(65939..66307) GB:FROM 65939 GB:TO 66307 GB:DIRECTION - GB:GENE vs.6 GB:PRODUCT Vs.6 GB:NOTE similar to T4 accession NP_049730.1; conserved matches Pfam Gly_radical formate acetyltransferase domain E=1.1e-19 GB:PROTEIN_ID AAQ81437.1 GB:DB_XREF GI:34732899 GB:GENE:GENE vs.6 LENGTH 122 SQ:AASEQ MLIGFQLLDGSNDHGSIFLVDDQTNNAKVIASKTYEIDTIVEDSVIRGRPGRFFDVQPEPTVEGGQHLNVNVLDRNTLEDAIVNPEKYPQLTIRVSGYAVRFNALTPEQQRDVITRTFTQSL GT:EXON 1|1-122:0| BL:SWS:NREP 1 BL:SWS:REP 1->122|GRCA_VIBHB|1e-34|58.2|122/125| PROS 92->100|PS00850|GLY_RADICAL_1|PDOC00665| BL:PDB:NREP 1 BL:PDB:REP 59->122|1mzoA|9e-26|78.1|64/756| RP:PDB:NREP 1 RP:PDB:REP 54->122|1cm5A|1e-21|72.5|69/759| RP:PFM:NREP 1 RP:PFM:REP 20->103|PF01228|5e-17|56.0|75/106|Gly_radical| HM:PFM:NREP 1 HM:PFM:REP 24->103|PF01228|1.6e-24|46.8|77/106|Gly_radical| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF01228|IPR001150| GO:PFM GO:0008152|"GO:metabolic process"|PF01228|IPR001150| RP:SCP:NREP 1 RP:SCP:REP 31->120|1r8wA|7e-26|32.2|90/786|c.7.1.1| HM:SCP:REP 62->122|1cm5A_|1.4e-22|50.8|61/0|c.7.1.1|1/1|PFL-like glycyl radical enzymes| OP:NHOMO 452 OP:NHOMOORG 270 OP:PATTERN -------------------------------------------------------------------- -----1------------------------------------------1---------------1------11111111---------1111-2----------------------------------------------------1-1----11----------1--------------------------1-111111111111111--11--1111----11111111-1111111111111111111--1---11-----11--1111----------------------------------------------------2-121111111111211111111-1-1111---1-1-11--------11-----------------1---2--1------------------------------------------------------------------2----------------------------------1--------------------------------------------------------1-------------1-1---------------------------------------------------------222-------21111111111111111111--1----------33222323332333333-3333333333333333332333221123333333333333333233333332-322222222222------------------222222222222222---------------------------------------23322222232222----------------------------------1-------------------------------------1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------121-1111---------4----- ---1-------------------------------111-1------------------------------------------------------------------------------------------------------------------------1-------------- STR:NPRED 69 STR:RPRED 56.6 SQ:SECSTR #####################################################HHHccccccccccEEEEEEccHHHHHHHHHcGGGcTTcEEEccccEEEGGGccHHHHHHHHTccccccc DISOP:02AL 1-2,121-123| PSIPRED ccEEEEccccccccccEEEEEcHHccccccccccEEEcEEEcHHHcccccccEEEEEEccHHcccEEEEEEEEcHHHHHHHHHcHHHccEEEEEEEEEEEEEEEccHHHHHHHHHHHHHHcc //