[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Burkholderia cepacia phage Bcep781 (bpbc0)
Gene : ORF16
DDBJ      :ORF16        terminase large subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  47/915 : Eukaryota  1/199 : Viruses  9/175   --->[See Alignment]
:507 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   325->485 3c6aA PDBj 7e-08 16.7 %
:RPS:PFM   290->486 PF03237 * Terminase_6 2e-13 28.4 %
:HMM:PFM   86->488 PF03237 * Terminase_6 4e-25 18.7 359/384  
:BLT:SWISS 71->148 Y1569_XYLFA 1e-05 32.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links Genpept Abbreviations Back to title page
GT:ID NP_705644.1 GT:GENE ORF16 GT:PRODUCT terminase large subunit GT:DATABASE NC_004333 GT:ORG bpbc0 GB:ACCESSION NC_004333 GB:LOCATION complement(14043..15566) GB:FROM 14043 GB:TO 15566 GB:DIRECTION - GB:GENE ORF16 GB:PRODUCT terminase large subunit GB:NOTE putative GB:PROTEIN_ID NP_705644.1 GB:DB_XREF GI:23752329 GB:GENE:GENE ORF16 LENGTH 507 SQ:AASEQ MPANIALDAPPVTAASSPVALGTPSAPIDPVDFLINLARTNFAAFVSLVHRPRYKHSAFSARVCAEIDKFIDDLLDGKRPVLMLTAPPQHGKSSLISRCLAPYLYGRLTGLLPAVRIANATYALPLARRNSTDAKSIMKEPVYRAVFPHVSLIGFKGNKDTSNEFDVPEGGEFRGVGVGGPLTGFSIDVGIIDDATKNAEEALSAVVQDGLENWYDSVLLTRLQQLSGVILIGTPWSANDLLARVRRKMEGQPNFTLLSFPALNDPDQIGYNPDLPLGALVPHLHSADKLREMRRNISEFWWSAMYQQVPLSEFGAIFSRDHLQYYRVAELPKQFVRVIMSCDATFKDGQASDFVFVGVWGKTADERVWLIDWRREKLAFMATAQAIADLKRKHAAVSRVYIEEAANGAALIDMLKKHFPMLEGVPPLGSKEARAHAVAWVWSNNCVMLPHPDERPGIGPVVNEITSFPDTITGHDDSVDGMTIALHQLCLRTPIAAMITREILNKA GT:EXON 1|1-507:0| BL:SWS:NREP 1 BL:SWS:REP 71->148|Y1569_XYLFA|1e-05|32.4|74/316| SEG 9->20|appvtaasspva| SEG 167->181|vpeggefrgvgvggp| RP:PDB:NREP 1 RP:PDB:REP 325->485|3c6aA|7e-08|16.7|150/198| RP:PFM:NREP 1 RP:PFM:REP 290->486|PF03237|2e-13|28.4|190/365|Terminase_6| HM:PFM:NREP 1 HM:PFM:REP 86->488|PF03237|4e-25|18.7|359/384|Terminase_6| OP:NHOMO 65 OP:NHOMOORG 57 OP:PATTERN -------------------------------------------------------------------- ---------------1------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------1---------1----1---------------------------2-----------------------2----------------------------------------------3------1----------------------------------------------------------3--------------------1-1----1------------------------------111111111---1---11-111111-1---11--1------1-22--1-----------1--------------------------1----------------------11--------------------------------------------1----------------------------1----------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ---------1111-------------------------------------------------------------------------------------------1-----------------------------111---------------------1---------------- STR:NPRED 150 STR:RPRED 29.6 SQ:SECSTR ####################################################################################################################################################################################################################################################################################################################################TEEEcccccTTccEEEEEEc##ccccccccEEEEEEEcccccEEEEEEEEEccccTTTHHHHHHHHHHHTTcc#cEEEcccHHHHHHHHHHHHTcccccccccHHHHHHHHHHHHHHHHTTcEEcccHH#######HHHHHHHcccc#ccccHHHHHHHHH###################### DISOP:02AL 1-5,311-314,506-508| PSIPRED cccccEEEcccccccccccccccccccccHHHHHHHHHHHcHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHccccccccccEEEEEEEcHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEccccccEEEEEcccccccccccEEEEccccccHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHccccccEEEEEEEEEcccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHccccccccccHHHcEEEEEEEccccccccccEEEEEEEEEEccccEEEEEEEEEcccHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccHHHHccHHHHccc //