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Shigella flexneri bacteriophage V (bpsf1)
Gene : orf40
DDBJ      :orf40        unknown
Swiss-Prot:YFDN_ECOLI   RecName: Full=Uncharacterized protein yfdN;

Homologs  Archaea  0/68 : Bacteria  13/915 : Eukaryota  0/199 : Viruses  2/175   --->[See Alignment]
:162 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   96->145 PF06069 * PerC 8e-10 60.0 %
:HMM:PFM   98->150 PF06069 * PerC 3.2e-12 37.7 53/90  
:BLT:SWISS 1->162 YFDN_ECOLI 2e-89 95.7 %

SeqInfo AminoSeq See neighboring genes
Links Genpept Abbreviations Back to title page
GT:ID NP_599072.1 GT:GENE orf40 GT:PRODUCT unknown GT:DATABASE NC_003444 GT:ORG bpsf1 GB:ACCESSION NC_003444 GB:LOCATION 29126..29614 GB:FROM 29126 GB:TO 29614 GB:DIRECTION + GB:GENE orf40 GB:PRODUCT unknown GB:PROTEIN_ID NP_599072.1 GB:DB_XREF GI:19549027 GB:GENE:GENE orf40 LENGTH 162 SQ:AASEQ MSLLNEVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVVHRCEEDTRRHFPRLTERAQEPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAFRESHSQQERNNFLARRERCLRKSSKRAASGDEWYLSGNYVGA GT:EXON 1|1-162:0| SW:ID YFDN_ECOLI SW:DE RecName: Full=Uncharacterized protein yfdN; SW:GN Name=yfdN; Synonyms=yzyA; OrderedLocusNames=b2357, JW5385; SW:KW Complete proteome. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->162|YFDN_ECOLI|2e-89|95.7|162/164| RP:PFM:NREP 1 RP:PFM:REP 96->145|PF06069|8e-10|60.0|50/77|PerC| HM:PFM:NREP 1 HM:PFM:REP 98->150|PF06069|3.2e-12|37.7|53/90|PerC| OP:NHOMO 20 OP:NHOMOORG 15 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--112-2-----1---1----31--1--2------------1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4,38-38,44-44,64-76,123-131,135-151,162-163| PSIPRED ccHHHHHHHHHHHccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEcccccEEEEEEEcHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccc //