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Shigella flexneri bacteriophage V (bpsf1)
Gene : orf43
DDBJ      :orf43        crossover junction endodeoxyribonuclease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  50/915 : Eukaryota  0/199 : Viruses  6/175   --->[See Alignment]
d.79.6
:129 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->120 1q8rA PDBj 6e-17 40.5 %
:RPS:SCOP  2->118 1q8rA  d.79.6.1 * 4e-15 40.9 %
:HMM:SCOP  2->122 1q8rA_ d.79.6.1 * 1.5e-27 38.6 %
:RPS:PFM   9->104 PF05866 * RusA 1e-08 43.3 %
:HMM:PFM   5->120 PF05866 * RusA 4.4e-23 29.1 110/116  
:BLT:SWISS 3->120 RUSA_ECO57 8e-17 42.3 %

SeqInfo AminoSeq See neighboring genes
Links Genpept Abbreviations Back to title page
GT:ID NP_599075.1 GT:GENE orf43 GT:PRODUCT crossover junction endodeoxyribonuclease GT:DATABASE NC_003444 GT:ORG bpsf1 GB:ACCESSION NC_003444 GB:LOCATION 30587..30976 GB:FROM 30587 GB:TO 30976 GB:DIRECTION + GB:GENE orf43 GB:PRODUCT crossover junction endodeoxyribonuclease GB:PROTEIN_ID NP_599075.1 GB:DB_XREF GI:19549030 GB:GENE:GENE orf43 LENGTH 129 SQ:AASEQ MKLILPFPPSVNTYWRHPNKGAFAGKSLISAAGRKFQSAACAAIVEQLRRLPKPTSAPASVEIVLFPPDNRIRDLDNYNKALFDVLTHAGVWEDDSQVKRMLVEWGPVIPEGKVEITISKYEKTAGAAA GT:EXON 1|1-129:0| BL:SWS:NREP 1 BL:SWS:REP 3->120|RUSA_ECO57|8e-17|42.3|111/120| BL:PDB:NREP 1 BL:PDB:REP 3->120|1q8rA|6e-17|40.5|111/118| RP:PFM:NREP 1 RP:PFM:REP 9->104|PF05866|1e-08|43.3|90/114|RusA| HM:PFM:NREP 1 HM:PFM:REP 5->120|PF05866|4.4e-23|29.1|110/116|RusA| GO:PFM:NREP 3 GO:PFM GO:0000287|"GO:magnesium ion binding"|PF05866|IPR008822| GO:PFM GO:0006281|"GO:DNA repair"|PF05866|IPR008822| GO:PFM GO:0006310|"GO:DNA recombination"|PF05866|IPR008822| RP:SCP:NREP 1 RP:SCP:REP 2->118|1q8rA|4e-15|40.9|110/118|d.79.6.1| HM:SCP:REP 2->122|1q8rA_|1.5e-27|38.6|114/118|d.79.6.1|1/1|Holliday junction resolvase RusA| OP:NHOMO 131 OP:NHOMOORG 56 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----177215163118-12145114864111113--1--------1111---1---12--3133443---------------1-----------------111--------------1------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------111-------------------------------------------1---------------------------------------------11------------------------------ STR:NPRED 111 STR:RPRED 86.0 SQ:SECSTR ##EEEcccccHHHHEEEcc#####ccEEEcHHHHHHHHHHHHHHHHTT##ccccccccEEEEEEEEccccccccGGGccHHHHHHHHHTTccccGGGEEEEEEEEEcccTTcEEEEEEEE######### DISOP:02AL 126-130| PSIPRED cEEEcccccccccEEEEcccccccccEEccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHccEEEccccEEEEEEEEcccccccEEEEEEEEEEccccccc //