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Lactococcus lactis bacteriophage TP901-1 (bptp0)
Gene : cI
DDBJ      :cI           CI
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  12/175   --->[See Alignment]
a.35.1
:180 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   1->81 2csfA PDBj 3e-06 11.0 %
:RPS:SCOP  7->124 1s4kA  a.35.1.6 * 3e-06 6.4 %
:HMM:SCOP  1->78 1y9qA1 a.35.1.8 * 8e-05 30.4 %
:HMM:PFM   28->72 PF01381 * HTH_3 2.8e-11 37.2 43/55  
:BLT:SWISS 6->128 RSR2_VIBCH 9e-06 28.3 %

SeqInfo AminoSeq See neighboring genes
Links Genpept Abbreviations Back to title page
GT:ID NP_112667.1 GT:GENE cI GT:PRODUCT CI GT:DATABASE NC_002747 GT:ORG bptp0 GB:ACCESSION NC_002747 GB:LOCATION complement(2646..3188) GB:FROM 2646 GB:TO 3188 GB:DIRECTION - GB:GENE cI GB:PRODUCT CI GB:NOTE repressor, experimental GB:PROTEIN_ID NP_112667.1 GB:DB_XREF GI:13786535 GB:GENE:GENE cI LENGTH 180 SQ:AASEQ MKTDTSNRLKQIMAERNLKQVDILNLSIPFQKKFGIKLSKSTLSQYVNSVQSPDQNRIYLLAKTLGVSEAWLMGFDVPMVESSKIENDSENIEETITVMKKLEEPRQKVVLDTAKIQLKEQDEQNKVKQIEDYRLSDEYLEEQISKASAYGGGQLNDNDKEFFKRLLKNTLKEKIDKGDL GT:EXON 1|1-180:0| BL:SWS:NREP 1 BL:SWS:REP 6->128|RSR2_VIBCH|9e-06|28.3|106/111| RP:PDB:NREP 1 RP:PDB:REP 1->81|2csfA|3e-06|11.0|73/101| HM:PFM:NREP 1 HM:PFM:REP 28->72|PF01381|2.8e-11|37.2|43/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 7->124|1s4kA|3e-06|6.4|110/120|a.35.1.6| HM:SCP:REP 1->78|1y9qA1|8e-05|30.4|69/0|a.35.1.8|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 33 OP:NHOMOORG 31 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------1-111--1-111-------1---------1------------212---------------------1-----11---------------------------1-----------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------1----11----1-----------1--1--1------1--------1-------1---1-1-------------------------------------- STR:NPRED 120 STR:RPRED 66.7 SQ:SECSTR ccTHHHHHHHHHHHHHTccHHHHHHHHHHHHHHTccTccHHHHHHHHHHcccccTTcHHHHHHHHHHHHHHTccHHHHHHHHHHHTcHHHHHHHcccHHHHHHHHHHcccccHHHHHHHc############################################################ DISOP:02AL 1-3,85-85,89-89,124-124,174-181| PSIPRED ccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccHHHHHHHHHcccHHHHccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHccccccccHHHHEEcccccccccHHHHHHHHHHccccHHHHcccc //