[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : cycB
DDBJ      :cycB         cyclodextrin-binding lipoprotein
Swiss-Prot:CYCB_BACSU   RecName: Full=Cyclodextrin-binding protein;Flags: Precursor;

Homologs  Archaea  15/68 : Bacteria  317/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:421 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   39->415 2zyoA PDBj 4e-68 37.4 %
:RPS:PDB   39->407 1a7lC PDBj 5e-65 27.6 %
:RPS:SCOP  81->420 1a7lA  c.94.1.1 * 1e-43 26.8 %
:HMM:SCOP  22->415 1eljA_ c.94.1.1 * 9e-89 32.7 %
:RPS:PFM   78->325 PF01547 * SBP_bac_1 1e-11 34.5 %
:HMM:PFM   51->330 PF01547 * SBP_bac_1 5e-35 28.5 263/314  
:BLT:SWISS 1->421 CYCB_BACSU 0.0 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB15421.1 GT:GENE cycB GT:PRODUCT cyclodextrin-binding lipoprotein GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(3507253..3508518) GB:FROM 3507253 GB:TO 3508518 GB:DIRECTION - GB:GENE cycB GB:PRODUCT cyclodextrin-binding lipoprotein GB:FUNCTION 16.1: Circulate GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 11682178; Product type t: transporter GB:PROTEIN_ID CAB15421.1 GB:DB_XREF GOA:O07009 HSSP:1MDP InterPro:IPR006061 SubtiList:BG12436 UniProtKB/Swiss-Prot:O07009 GB:GENE:GENE cycB LENGTH 421 SQ:AASEQ MKMAKKCSVFMLCAAVSLSLAACGPKESSSAKSSSKGSELVVWEDKEKSNGIKDAVAAFEKEHDVKVKVVEKPYAKQIEDLRMDGPAGTGPDVLTMPGDQIGTAVTEGLLKELHVKKDVQSLYTDASIQSQMVDQKLYGLPKAVETTVLFYNKDLITEKELPKTLEEWYDYSKKTADGSKFGFLALFDQIYYAESVMSGYGGYIFGKAKDGSYNPSDIGINNEGAVKGAALIQKFYKDGLFPAGIIGEQGINVLESLFTEGKAAAIISGPWNVEAFSNAGINYGITKLPKLENGKNMSSFIGVKSYNVSAFSKNEELAQELAVFLANEKNSKTRYEETKEVPAVKSLANDPAIMKSEAARAVTEQSRFSEPTPNIPEMNEIWTPADSALQTVATGKADPKQALDQAAETAKGQIKAKHSGK GT:EXON 1|1-421:0| SW:ID CYCB_BACSU SW:DE RecName: Full=Cyclodextrin-binding protein;Flags: Precursor; SW:GN Name=cycB; Synonyms=yvfK; OrderedLocusNames=BSU34160; SW:KW Cell membrane; Complete proteome; Lipoprotein; Membrane; Palmitate;Signal; Sugar transport; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->421|CYCB_BACSU|0.0|100.0|421/421| GO:SWS:NREP 4 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0008643|"GO:carbohydrate transport"|Sugar transport| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 1 TM:REGION 7->23| SEG 12->23|lcaavslslaac| SEG 26->38|kesssakssskgs| SEG 60->72|ekehdvkvkvvek| BL:PDB:NREP 1 BL:PDB:REP 39->415|2zyoA|4e-68|37.4|369/385| RP:PDB:NREP 1 RP:PDB:REP 39->407|1a7lC|5e-65|27.6|359/362| RP:PFM:NREP 1 RP:PFM:REP 78->325|PF01547|1e-11|34.5|229/282|SBP_bac_1| HM:PFM:NREP 1 HM:PFM:REP 51->330|PF01547|5e-35|28.5|263/314|SBP_bac_1| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF01547|IPR006059| GO:PFM GO:0006810|"GO:transport"|PF01547|IPR006059| RP:SCP:NREP 1 RP:SCP:REP 81->420|1a7lA|1e-43|26.8|332/380|c.94.1.1| HM:SCP:REP 22->415|1eljA_|9e-89|32.7|367/380|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 564 OP:NHOMOORG 333 OP:PATTERN --1----1--------2-1111--1--1--2-----------------------12-111-------- ----3111--1---------------------------------3421121-3-4-1----1-111122212111-------3-----------------------------------------------------433-----1----------------------11---------1----2312132-13-11111-221111111423312111214-22123323348-11111111111111-----11---1--11111----------1111212222111111111111112111122221111111---11113---1-------1--1211-2232-1-1-13--------4---11131-------------1-------------33322232233----------2--233121223356------------------------------------------------------------------------------------11--------1------------------------------------------1-----------------------11-11------------------------------121----------------------------------------22-112-2222222222-22222223222222222222221211-21222222222222221-212221--122222222222-------------1-2--111221-----1--------------1--------1----1--------------2231111111322----------------------------------1-------------------------1332223222--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 382 STR:RPRED 90.7 SQ:SECSTR ######################################cEEEEccTTccHHHHHHHHHHHHHHcccEEEEccccTTHHHHHHHHGGGTccccEEEEEGGGHHHHHHTTccccccccHHHHTTccHHHHHHTEETTEEccEEEEEEccEEEEETTTccGcccccccTTHHHHHHHHHTTTccccccccccHHHHHHHHHHTTcEEEEEcccccEEEEEEETTcHHHHHHHHHHHHHHHTTcccTTccHHHcHHHHHHHHHTTcccEEEEcGGGHHHHHHHTccEEEEcccccTTTcccccEEEEEEEEEcTTcTTHHHHHHHHHHTTccHHHHHHHHHHccccEEccHHHHHHHTTcHHHHHHHHHHHHcEEccccTTHHHHHHHHHHHHHHHHHTcccHHHHHHHTcccHHHHccccccc# DISOP:02AL 1-3, 25-36, 419-421| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHcccccEEEEEccHHHHHHHHccccccccccHHHHHcccHHHHHHcEEccEEEEEEEEEccEEEEEEHHHHHcccccccHHHHHHHHHHHHccccccEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccEEEEEccHHHHHHHHHccccEEEEEcccccccccccEEEEEEEEEEEcccccHHHHHHHHHHHccHHHHHHHHHHcccccccHHHHccHHHHccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccc //