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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : gabP
DDBJ      :gabP         gamma-aminobutyrate (GABA) permease
Swiss-Prot:GABP_BACSU   RecName: Full=GABA permease;AltName: Full=4-amino butyrate transport carrier;AltName: Full=Gamma-aminobutyrate permease;

Homologs  Archaea  9/68 : Bacteria  446/915 : Eukaryota  105/199 : Viruses  0/175   --->[See Alignment]
:469 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   17->97 3hqkD PDBj 2e-05 23.8 %
:BLT:PDB   213->378 3giaA PDBj 3e-04 25.7 %
:RPS:PFM   19->421 PF00324 * AA_permease 1e-43 35.4 %
:HMM:PFM   16->454 PF00324 * AA_permease 3.9e-131 39.1 435/479  
:BLT:SWISS 1->469 GABP_BACSU 0.0 100.0 %
:PROS 41->71|PS00218|AMINO_ACID_PERMEASE_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB12450.2 GT:GENE gabP GT:PRODUCT gamma-aminobutyrate (GABA) permease GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(685155..686564) GB:FROM 685155 GB:TO 686564 GB:DIRECTION - GB:GENE gabP GB:PRODUCT gamma-aminobutyrate (GABA) permease GB:FUNCTION 16.1: Circulate 16.8: Protect GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 15849754, 16547045, 16850406, 8951816, 9677314; Product type t: transporter GB:PROTEIN_ID CAB12450.2 GB:DB_XREF GOA:P46349 InterPro:IPR004841 SubtiList:BG11328 UniProtKB/Swiss-Prot:P46349 GB:GENE:GENE gabP LENGTH 469 SQ:AASEQ MNQSQSGLKKELKTRHMTMISIAGVIGAGLFVGSGSVIHSTGPGAVVSYALAGLLVIFIMRMLGEMSAVNPTSGSFSQYAHDAIGPWAGFTIGWLYWFFWVIVIAIEAIAGAGIIQYWFHDIPLWLTSLILTIVLTLTNVYSVKSFGEFEYWFSLIKVVTIIAFLIVGFAFIFGFAPGSEPVGFSNLTGKGGFFPEGISSVLLGIVVVIFSFMGTEIVAIAAGETSNPIESVTKATRSVVWRIIVFYVGSIAIVVALLPWNSANILESPFVAVLEHIGVPAAAQIMNFIVLTAVLSCLNSGLYTTSRMLYSLAERNEAPRRFMKLSKKGVPVQAIVAGTFFSYIAVVMNYFSPDTVFLFLVNSSGAIALLVYLVIAVSQLKMRKKLEKTNPEALKIKMWLFPFLTYLTIIAICGILVSMAFIDSMRDELLLTGVITGIVLISYLVFRKRKVSEKAAANPVTQQQPDILP GT:EXON 1|1-469:0| SW:ID GABP_BACSU SW:DE RecName: Full=GABA permease;AltName: Full=4-amino butyrate transport carrier;AltName: Full=Gamma-aminobutyrate permease; SW:GN Name=gabP; OrderedLocusNames=BSU06310; SW:KW Amino-acid transport; Cell membrane; Complete proteome; Membrane;Transmembrane; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->469|GABP_BACSU|0.0|100.0|469/469| GO:SWS:NREP 5 GO:SWS GO:0006865|"GO:amino acid transport"|Amino-acid transport| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 41->71|PS00218|AMINO_ACID_PERMEASE_1|PDOC00191| TM:NTM 12 TM:REGION 16->38| TM:REGION 44->66| TM:REGION 89->111| TM:REGION 120->142| TM:REGION 153->175| TM:REGION 199->221| TM:REGION 237->259| TM:REGION 274->296| TM:REGION 329->351| TM:REGION 358->380| TM:REGION 398->420| TM:REGION 425->446| SEG 101->115|viviaieaiagagii| SEG 124->138|lwltsliltivltlt| SEG 197->212|gissvllgivvvifsf| BL:PDB:NREP 2 BL:PDB:REP 17->97|3hqkD|2e-05|23.8|80/419| BL:PDB:REP 213->378|3giaA|3e-04|25.7|148/433| RP:PFM:NREP 1 RP:PFM:REP 19->421|PF00324|1e-43|35.4|398/429|AA_permease| HM:PFM:NREP 1 HM:PFM:REP 16->454|PF00324|3.9e-131|39.1|435/479|AA_permease| GO:PFM:NREP 3 GO:PFM GO:0006810|"GO:transport"|PF00324|IPR004841| GO:PFM GO:0016020|"GO:membrane"|PF00324|IPR004841| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00324|IPR004841| OP:NHOMO 3428 OP:NHOMOORG 560 OP:PATTERN --------11111---------------------1------------1--------------11---- ---1152333424251244-412253444443-11117DD----2-21122288A824-----A119755-5222555-----------------------1------1--------------------1-------------------------------------------------------------31A7787878868A888911668B88754591712222227155555555555555466667155243273547766432536416662222111-22-----------1111111111111-212221111---54222222211---441111----------2212--1-11--1-------1--134334-------------1-111111112------2------111-111--1--1--------------44444444-223----------------1-11-111111111-1----11-211-18BBBB836565AA33888848D825555-1443--1--7----1-------41---------1-----------3--------------------1-----1-------3-1112111-------111---------------------------1------------87676859888988888-88A8888878888888888CCC797749899999999999899B88877784-888788788888--3------1111--------------------FFGGDA8-----88789A49-DHDB1333333333333---------------2233333333--------------------------------------------------------------- ------------322HGBBMFDBPMOM9A8678DEBDCCCCADA9AFGGHOTjaDCG99AAAFMPFGJ4MEEODOIHAHJDKLMQNE8-6J4G6AC6473988879-------------------------------------1--------------239-1-1-----4--------------1--2B----1-1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 228 STR:RPRED 48.6 SQ:SECSTR ################HHHHHHHHHTTcHHHHHHHHHH#HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccHHHHHHHHHHH###################################################################################################################THHHHHHTTGGGcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHGHHHHHHHHHHHHHHHHHHHHHH#######HHHHHHHHHHHHTTTHHHHHHHHHHccccccccTccTHHHHHHHHH#HHHHHHH######ccHHHH####HHHHHHHHHHHHHHHHHH########################################################################################### PSIPRED ccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc //