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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : greA
DDBJ      :greA         transcription elongation factor
Swiss-Prot:GREA_BACSU   RecName: Full=Transcription elongation factor greA;AltName: Full=Transcript cleavage factor greA;AltName: Full=General stress protein 20M;         Short=GSP20M;

Homologs  Archaea  0/68 : Bacteria  856/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.2.1d.26.1
:157 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->133 1grjA PDBj 6e-22 40.3 %
:RPS:PDB   29->156 3bmbA PDBj 2e-31 22.5 %
:RPS:SCOP  5->81 1grjA1  a.2.1.1 * 1e-22 44.2 %
:RPS:SCOP  82->156 2etnA2  d.26.1.2 * 8e-20 37.3 %
:HMM:SCOP  5->82 1grjA1 a.2.1.1 * 9.4e-28 52.6 %
:HMM:SCOP  81->159 1grjA2 d.26.1.2 * 1.9e-22 48.1 %
:RPS:PFM   9->77 PF03449 * GreA_GreB_N 6e-16 60.9 %
:RPS:PFM   81->156 PF01272 * GreA_GreB 2e-14 53.9 %
:HMM:PFM   4->77 PF03449 * GreA_GreB_N 1.7e-30 52.8 72/74  
:HMM:PFM   85->157 PF01272 * GreA_GreB 4e-29 54.8 73/77  
:BLT:SWISS 1->157 GREA_BACSU 5e-85 100.0 %
:PROS 20->51|PS00829|GREAB_1
:PROS 122->138|PS00830|GREAB_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB14674.1 GT:GENE greA GT:PRODUCT transcription elongation factor GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(2791494..2791967) GB:FROM 2791494 GB:TO 2791967 GB:DIRECTION - GB:GENE greA GB:PRODUCT transcription elongation factor GB:FUNCTION 16.2: Construct biomass (Anabolism) GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 10910724, 16014871, 16707701; Product type f: factor GB:PROTEIN_ID CAB14674.1 GB:DB_XREF GOA:P80240 HSSP:1GRJ InterPro:IPR018151 SubtiList:BG19019 UniProtKB/Swiss-Prot:P80240 GB:GENE:GENE greA LENGTH 157 SQ:AASEQ MAQEKVFPMTAEGKQKLEQELEYLKTVKRKEVVERIKIARSFGDLSENSEYDSAKEEQAFVEGRVTTLENMIRNAKIIEDDGGSNVVGLGKTVTFVELPDGDEESYTIVGSAEADPFEGKISNDSPIAKSLLGKKVDEEVTVQTPGGEMLVKIVKIS GT:EXON 1|1-157:0| SW:ID GREA_BACSU SW:DE RecName: Full=Transcription elongation factor greA;AltName: Full=Transcript cleavage factor greA;AltName: Full=General stress protein 20M; Short=GSP20M; SW:GN Name=greA; OrderedLocusNames=BSU27320; SW:KW Coiled coil; Complete proteome; Direct protein sequencing;DNA-binding; Stress response; Transcription; Transcription regulation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->157|GREA_BACSU|5e-85|100.0|157/157| GO:SWS:NREP 4 GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0006950|"GO:response to stress"|Stress response| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| PROS 20->51|PS00829|GREAB_1|PDOC00651| PROS 122->138|PS00830|GREAB_2|PDOC00651| BL:PDB:NREP 1 BL:PDB:REP 5->133|1grjA|6e-22|40.3|129/151| RP:PDB:NREP 1 RP:PDB:REP 29->156|3bmbA|2e-31|22.5|120/135| RP:PFM:NREP 2 RP:PFM:REP 9->77|PF03449|6e-16|60.9|69/73|GreA_GreB_N| RP:PFM:REP 81->156|PF01272|2e-14|53.9|76/78|GreA_GreB| HM:PFM:NREP 2 HM:PFM:REP 4->77|PF03449|1.7e-30|52.8|72/74|GreA_GreB_N| HM:PFM:REP 85->157|PF01272|4e-29|54.8|73/77|GreA_GreB| GO:PFM:NREP 6 GO:PFM GO:0003677|"GO:DNA binding"|PF03449|IPR001437| GO:PFM GO:0003711|"GO:transcription elongation regulator activity"|PF03449|IPR001437| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF03449|IPR001437| GO:PFM GO:0003677|"GO:DNA binding"|PF01272|IPR001437| GO:PFM GO:0003711|"GO:transcription elongation regulator activity"|PF01272|IPR001437| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01272|IPR001437| RP:SCP:NREP 2 RP:SCP:REP 5->81|1grjA1|1e-22|44.2|77/78|a.2.1.1| RP:SCP:REP 82->156|2etnA2|8e-20|37.3|75/79|d.26.1.2| HM:SCP:REP 5->82|1grjA1|9.4e-28|52.6|78/0|a.2.1.1|1/1|GreA transcript cleavage protein, N-terminal domain| HM:SCP:REP 81->159|1grjA2|1.9e-22|48.1|79/79|d.26.1.2|1/1|FKBP-like| OP:NHOMO 1195 OP:NHOMOORG 858 OP:PATTERN -------------------------------------------------------------------- 12211--111111111111-11111111111111111111111111-1111-11111111-1111111111111111111111-----111111111--11111111111111111111111111111111111111111111112-------------------------------------21222--1111111111111111111111111111111111211111112111111111111111111111222222222222222212211111111111111111111111111111111111111111111111111111322222222222112212222211122211111111111111111--111122111111122111111121111111111111-11111111111111122121112211111111111111111111111122222211111111111111111111111111111112212222222222222222222222222222222222222222222222222213222222222222222222222211111111111111222222212221122121111111111111111111121111112222222222122222222222222222221-1111111111122222222222222222-22222222222222222222222222222222222222222222222222221222222212222111211111111112222222222222222222222221211122222223222222222221111111112222222222222222222222222111111111111111111111111111111-1111111111111111111111111111111- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 153 STR:RPRED 97.5 SQ:SECSTR ####ccEEHccHHHHHHHHHHHHHHHHHccccEEEHHHHHHHHHHHHcGGGTTcHHHHHHccccHHHHHHHHHTcEEEcGGGccTcccTTcEEEEEETTTccEEEEEEEcGGGcccTTTEEETTcHHHHHHTTccTTcEEEEEETTTEEEEEEEEEE DISOP:02AL 1-3| PSIPRED ccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEccccccccEEEEccEEEEEEcccccEEEEEEEcHHHccccccEEccccHHHHHHHccccccEEEEEcccccEEEEEEEEc //