[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : gudB
DDBJ      :gudB         cryptic glutamate dehydrogenase
Swiss-Prot:GUDB_BACSU   RecName: Full=NAD-specific glutamate dehydrogenase;         Short=NAD-GDH;         EC=1.4.1.2;

Homologs  Archaea  52/68 : Bacteria  609/915 : Eukaryota  177/199 : Viruses  0/175   --->[See Alignment]
c.2.1c.58.1
:427 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->427 1euzF PDBj e-113 49.4 %
:RPS:PDB   50->419 1bw9B PDBj 5e-85 27.8 %
:RPS:SCOP  4->195 1hwxA2  c.58.1.1 * 2e-53 36.2 %
:RPS:SCOP  197->374 1hwxA1  c.2.1.7 * 2e-59 39.9 %
:HMM:SCOP  16->196 1hwxA2 c.58.1.1 * 2e-65 50.6 %
:HMM:SCOP  194->429 1gtmA1 c.2.1.7 * 8.9e-80 44.1 %
:RPS:PFM   47->177 PF02812 * ELFV_dehydrog_N 2e-36 53.1 %
:RPS:PFM   194->420 PF00208 * ELFV_dehydrog 2e-53 46.7 %
:HMM:PFM   194->425 PF00208 * ELFV_dehydrog 3.4e-80 46.1 232/244  
:HMM:PFM   45->177 PF02812 * ELFV_dehydrog_N 1.4e-51 51.5 130/131  
:BLT:SWISS 1->427 GUDB_BACSU 0.0 100.0 %
:PROS 113->126|PS00074|GLFV_DEHYDROGENASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB14212.2 GT:GENE gudB GT:PRODUCT cryptic glutamate dehydrogenase GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(2402067..2403350) GB:FROM 2402067 GB:TO 2403350 GB:DIRECTION - GB:GENE gudB GB:PRODUCT cryptic glutamate dehydrogenase GB:FUNCTION 16.11: Scavenge (Catabolism) GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 18326565, 9829940; Product type e: enzyme GB:PROTEIN_ID CAB14212.2 GB:DB_XREF GOA:P50735 HSSP:1GTM InterPro:IPR016040 SubtiList:BG11435 UniProtKB/Swiss-Prot:P50735 GB:GENE:GENE gudB LENGTH 427 SQ:AASEQ MAADRNTGHTEEDKLDVLKSTQTVIHKALEKLGYPEEVYELLKEPMRLLTVKIPVRMDDGSVKIFTGYRAQHNDSVGPTKGGIRFHPNVTEKEVKAVKALSIWMSLKCGIIDLPYGGGKGGIVCDPRDMSFRELERLSRGYVRAISQIVGPTKDVPAPDVFTNSQIMAWMMDEYSRIDEFNSPGFITGKPLVLGGSHGRESATAKGVTICIKEAAKKRGIDIKGARVVVQGFGNAGSYLAKFMHDAGAKVVGISDAYGGLYDPEGLDIDYLLDRRDSFGTVTKLFNDTITNQELLELDCDILVPAAIENQITEENAHNIRAKIVVEAANGPTTLEGTKILSDRDILLVPDVLASAGGVTVSYFEWVQNNQGFYWSEEEVEEKLEKMMVKSFNNIYEMANNRRIDMRLAAYMVGVRKMAEASRFRGWI GT:EXON 1|1-427:0| SW:ID GUDB_BACSU SW:DE RecName: Full=NAD-specific glutamate dehydrogenase; Short=NAD-GDH; EC=1.4.1.2; SW:GN Name=gudB; Synonyms=ypcA; OrderedLocusNames=BSU22960; SW:KW Complete proteome; NAD; Oxidoreductase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->427|GUDB_BACSU|0.0|100.0|427/427| GO:SWS:NREP 2 GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| PROS 113->126|PS00074|GLFV_DEHYDROGENASE|PDOC00071| SEG 376->389|eeeveeklekmmvk| BL:PDB:NREP 1 BL:PDB:REP 14->427|1euzF|e-113|49.4|411/417| RP:PDB:NREP 1 RP:PDB:REP 50->419|1bw9B|5e-85|27.8|335/347| RP:PFM:NREP 2 RP:PFM:REP 47->177|PF02812|2e-36|53.1|128/130|ELFV_dehydrog_N| RP:PFM:REP 194->420|PF00208|2e-53|46.7|227/234|ELFV_dehydrog| HM:PFM:NREP 2 HM:PFM:REP 194->425|PF00208|3.4e-80|46.1|232/244|ELFV_dehydrog| HM:PFM:REP 45->177|PF02812|1.4e-51|51.5|130/131|ELFV_dehydrog_N| GO:PFM:NREP 6 GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF02812|IPR006097| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02812|IPR006097| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02812|IPR006097| GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF00208|IPR006096| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00208|IPR006096| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00208|IPR006096| RP:SCP:NREP 2 RP:SCP:REP 4->195|1hwxA2|2e-53|36.2|185/208|c.58.1.1| RP:SCP:REP 197->374|1hwxA1|2e-59|39.9|178/293|c.2.1.7| HM:SCP:REP 16->196|1hwxA2|2e-65|50.6|178/208|c.58.1.1|1/1|Aminoacid dehydrogenase-like, N-terminal domain| HM:SCP:REP 194->429|1gtmA1|8.9e-80|44.1|236/0|c.2.1.7|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1217 OP:NHOMOORG 838 OP:PATTERN 111-1111122222411122221-3333112311--------1--1---1113-11121111221111 122-11121121111------1---1------11111277-212-1121--111112-----21-232221111111111111---1-2222-2112--1143431-22311111111-11111-11-11----1122222---211121111----------11-12211-1-----1----22222--1222222222221222222373323223344332211111133211111111111111111121----1-----11--11-1-------111111111111111111111-------------1111111111-211-11111111111111111111111311--111-11241-224-1112-11112-----1--11211-----11111111112-11---1--1-1-------21---1---1-1121111222--------------1------------------------------12132-221221111111111111121111111112332--11111123211-1112--1---112222221111-12-112-1-1-111--1121112122222232211111-----111111111111--1--11-32-1222-1----112111-1121-11---2111------1-1-1111111111111-111111111111111111122211111221222222222222221111-111-111111111111---211111-1-1111-1111111-111--1112222222111-122222222122222---1111111111--------------1111111111-------1--------------1-1-------------------------1221211111121 22--111-41-111--1121111111111111111--11111111111111111-1111111111-1111111112222211111111-1--111111111-1111-11212222322111111111113E3-223111121121112111123-11222373311252421141222-----4374761492211111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 424 STR:RPRED 99.3 SQ:SECSTR ###HHHHHHTcHHHHHHHHHHHHHHHTTHHHHHTHTTHHHHHTcccEEEcHHHHHccccEEEEEEETTTEEEEcccccEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEEEEcccGGGccHHHHHHHHHHHHHHHTTTcTTEEccccTTccHHHHHHHHTTccccHTcccGcccccccGGGTcccccHHHHHHHHHHHHHHHHHHTTccccTTEEEEEcccHHHHHHHHHHHHTTcEEEEEEETTEEEEcTTcccccHHHHHHHHHHHHHHTTcEEccGGGGGGccccEEEEccccccccHHHHHHccccEEccccccccccHHHHHHHHTTcEEccHHHHTTHHHHHHHHHHTTcHHTccccHHHHHHHHHHTHHHHHHHHHHHHHHHTccHHHHHHHHHHHHTTcHHHHHccc DISOP:02AL 427-428| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccEEEEEEEEEEcccccEEEEEEEEEEEccccccEEccEEEcccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccHHccHHHHHHHHHHHHHHHHHHccccccEEcccccccHHHHHHHHHHHHHHccccccEEEEcccHHHccccccccHHHHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccEEEEccccccHHHHHHHHHHcccEEccccccccccccccccccEEEEccccccccHHHHHHccccEEEEcccccccHHHHHHHHHcccEEEcHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccc //