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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : helD
DDBJ      :helD         DNA 3'-5' helicase IV
Swiss-Prot:HELD_BACSU   RecName: Full=Helicase IV;         EC=3.6.1.-;

Homologs  Archaea  0/68 : Bacteria  156/915 : Eukaryota  2/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:774 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   207->251 1qhhA PDBj 2e-04 38.6 %
:BLT:PDB   532->627 1uaaB PDBj 3e-06 30.2 %
:BLT:PDB   606->774 3dmnA PDBj 8e-24 40.8 %
:RPS:PDB   607->774 3dmnA PDBj 1e-14 33.8 %
:RPS:SCOP  212->637 1w36B1  c.37.1.19 * 3e-15 14.2 %
:RPS:SCOP  632->774 1qhh.1  c.37.1.19 * 1e-16 16.8 %
:HMM:SCOP  203->776 1qhh.1 c.37.1.19 * 4e-55 23.3 %
:RPS:PFM   539->676 PF00580 * UvrD-helicase 6e-10 28.3 %
:HMM:PFM   214->263 PF00580 * UvrD-helicase 2.8e-07 34.0 47/533  
:HMM:PFM   359->676 PF00580 * UvrD-helicase 6.9e-17 22.4 245/533  
:BLT:SWISS 1->774 HELD_BACSU 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB15350.1 GT:GENE helD GT:PRODUCT DNA 3'-5' helicase IV GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(3434327..3436651) GB:FROM 3434327 GB:TO 3436651 GB:DIRECTION - GB:GENE helD GB:PRODUCT DNA 3'-5' helicase IV GB:FUNCTION 16.6: Maintain 16.8: Protect GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 11544244; Product type e: enzyme GB:PROTEIN_ID CAB15350.1 GB:DB_XREF GOA:O32215 HSSP:1PJR InterPro:IPR014016 SubtiList:BG14101 UniProtKB/Swiss-Prot:O32215 GB:GENE:GENE helD LENGTH 774 SQ:AASEQ MNQQDKEWKEEQSRIDEVLKELEKKERFLETSAGGLKHDIIGLRKSFWEDVKVNFDDAHEAIETMASIKQQAELLSDREHNHRRMDQQLKRIHQLKKSPYFGRIDFIENGEEQAERIYIGLASCLDEKEEHFLIYDWRAPISSLYYNYSPGKAEYEVPGETIEGEMVLKRQFMIKNGTLKAMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTIQKEQNQIIRNEKSKILIVQGAAGSGKTSAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENMEQATFQEYIEHRLGRKFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYVTRLSSEGMIFKNIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLLSELNKLEKKERRKDWVVHEAELLDKEDYLDVYKKLQERKRFSESTFNDYQREQQLLAAIIVKKAFKPLKQAVRLLAFLDVTQLYLQLFSGWGGKFQHEKMDAIGELTRSAFTDNKLLYEDAAPFLYMQDLIEGRKKNTKIKHLFIDEAQDYSPFQMAYMRSIFPAASMTVLGDINQSIYAHTINGDQRMDACFEDEPAEYVRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRSGEMPLVVKTEGHESLCQKLAQEIGRLKKKGHETIAVICKTAHQCIQAHAHMSEYTDVRLIHKENQPFQKGVCVIPVYLAKGIEFDAVLVYDASEEHYHTEHDRRLLYTACTRAMHMLAVFYTGEASPFVTAVPPHLYQIAE GT:EXON 1|1-774:0| SW:ID HELD_BACSU SW:DE RecName: Full=Helicase IV; EC=3.6.1.-; SW:GN Name=helD; Synonyms=yvgS; OrderedLocusNames=BSU33450; SW:KW ATP-binding; Coiled coil; Complete proteome; Cytoplasm; DNA-binding;Helicase; Hydrolase; Nucleotide-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->774|HELD_BACSU|0.0|100.0|774/774| GO:SWS:NREP 6 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0004386|"GO:helicase activity"|Helicase| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| SEG 17->30|evlkelekkerfle| SEG 397->410|kwllselnklekke| BL:PDB:NREP 3 BL:PDB:REP 207->251|1qhhA|2e-04|38.6|44/164| BL:PDB:REP 532->627|1uaaB|3e-06|30.2|96/633| BL:PDB:REP 606->774|3dmnA|8e-24|40.8|157/159| RP:PDB:NREP 1 RP:PDB:REP 607->774|3dmnA|1e-14|33.8|157/159| RP:PFM:NREP 1 RP:PFM:REP 539->676|PF00580|6e-10|28.3|138/449|UvrD-helicase| HM:PFM:NREP 2 HM:PFM:REP 214->263|PF00580|2.8e-07|34.0|47/533|UvrD-helicase| HM:PFM:REP 359->676|PF00580|6.9e-17|22.4|245/533|UvrD-helicase| GO:PFM:NREP 4 GO:PFM GO:0003677|"GO:DNA binding"|PF00580|IPR000212| GO:PFM GO:0004003|"GO:ATP-dependent DNA helicase activity"|PF00580|IPR000212| GO:PFM GO:0005524|"GO:ATP binding"|PF00580|IPR000212| GO:PFM GO:0006281|"GO:DNA repair"|PF00580|IPR000212| RP:SCP:NREP 2 RP:SCP:REP 212->637|1w36B1|3e-15|14.2|423/469|c.37.1.19| RP:SCP:REP 632->774|1qhh.1|1e-16|16.8|143/623|c.37.1.19| HM:SCP:REP 203->776|1qhh.1|4e-55|23.3|425/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 268 OP:NHOMOORG 159 OP:PATTERN -------------------------------------------------------------------- ---121111111111------1---1------11112222-4242412-111111112--3321423444-11111111111--------11--------------------------------------------1-------1--------------------------------------1-------2-12222223212222222-11-1222---21--------22--------------------12212212111222222422111-----------------------------------------------1112333323222222133222211---1-1--52-----2--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------1-1----1--11-11-------------------------------------1-------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------- -------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------1------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 294 STR:RPRED 38.0 SQ:SECSTR ##############################################################################################################################################################################################################HHHHTTccHHHHHHHHcccccEEEEEcT#TccHHHHHHHHHHHHH#################################################################################################################################################################################################################################################################################EETTEEcccccccccccEEEEccGGGccHHHHHHHTTccTTcEEEEEEcTTccccHHHHHccEEEcccccHHHHTcHHHHHHccccHHHHHHHHTTcccccccccccTTcHHHEEEEEccHHHHHHHHHHHHHHHHTTcTccEEEEEccHHHHHHHHHHHHTTTccEEEccccccccccEEEEEGGGcTTccEEEEEEETccTTTcccGGGHHHHHHHHTTEEEEEHEEEEccccGGGTTccGGGcEEcc DISOP:02AL 1-4, 198-207| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccEEEEEEEEEEccccccEEEEEcccHHHHHHHcccccccEEEEEEEEEEEEEEEEEEEEEcccHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHcccccccccEEEEEccHHHHHHHHHHHHHccccccEEEcHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHcccccccccccccccEEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHHHHHHHcEEEEEEccccccHHHcccHHHHEEcc //