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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : infC
DDBJ      :infC         initiation factor IF-3
Swiss-Prot:IF3_BACSU    RecName: Full=Translation initiation factor IF-3;

Homologs  Archaea  0/68 : Bacteria  887/915 : Eukaryota  19/199 : Viruses  0/175   --->[See Alignment]
d.15.8d.68.1
:173 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->64 1tifA PDBj 7e-19 68.9 %
:BLT:PDB   84->171 1tigA PDBj 2e-41 86.4 %
:RPS:PDB   83->173 2crqA PDBj 2e-19 22.0 %
:RPS:SCOP  4->64 1tifA  d.15.8.1 * 7e-17 68.9 %
:RPS:SCOP  84->171 1tigA  d.68.1.1 * 5e-34 86.4 %
:HMM:SCOP  4->79 1tifA_ d.15.8.1 * 1.1e-29 55.3 %
:HMM:SCOP  83->172 2ifeA_ d.68.1.1 * 1.8e-34 56.7 %
:RPS:PFM   8->64 PF05198 * IF3_N 5e-11 56.1 %
:RPS:PFM   83->168 PF00707 * IF3_C 2e-23 59.3 %
:HMM:PFM   84->170 PF00707 * IF3_C 2.2e-39 55.2 87/88  
:HMM:PFM   4->78 PF05198 * IF3_N 6.9e-36 61.3 75/76  
:BLT:SWISS 1->173 IF3_BACSU 4e-75 100.0 %
:PROS 59->72|PS00938|IF3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB14847.1 GT:GENE infC GT:PRODUCT initiation factor IF-3 GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(2952828..2953349) GB:FROM 2952828 GB:TO 2953349 GB:DIRECTION - GB:GENE infC GB:PRODUCT initiation factor IF-3 GB:FUNCTION 16.2: Construct biomass (Anabolism) GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 12682299, 17289755; Product type f: factor GB:PROTEIN_ID CAB14847.1 GB:DB_XREF GOA:P55872 HSSP:2IFE InterPro:IPR019814 SubtiList:BG11944 UniProtKB/Swiss-Prot:P55872 GB:GENE:GENE infC LENGTH 173 SQ:AASEQ MISKDQLVNEGIRAREVRLIGQNGDQLGIKSRQEALEIAGRANLDLVLVAANAKPPVCRIMDYGKFRFEQQKKEKEARKNQKIINLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLMLAPKNEKQ GT:EXON 1|1-173:0| SW:ID IF3_BACSU SW:DE RecName: Full=Translation initiation factor IF-3; SW:GN Name=infC; OrderedLocusNames=BSU28870; SW:KW Complete proteome; Cytoplasm; Initiation factor; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->173|IF3_BACSU|4e-75|100.0|173/173| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003743|"GO:translation initiation factor activity"|Initiation factor| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 59->72|PS00938|IF3|PDOC00723| SEG 42->53|anldlvlvaana| SEG 65->82|kfrfeqqkkekearknqk| BL:PDB:NREP 2 BL:PDB:REP 4->64|1tifA|7e-19|68.9|61/76| BL:PDB:REP 84->171|1tigA|2e-41|86.4|88/88| RP:PDB:NREP 1 RP:PDB:REP 83->173|2crqA|2e-19|22.0|91/112| RP:PFM:NREP 2 RP:PFM:REP 8->64|PF05198|5e-11|56.1|57/74|IF3_N| RP:PFM:REP 83->168|PF00707|2e-23|59.3|86/87|IF3_C| HM:PFM:NREP 2 HM:PFM:REP 84->170|PF00707|2.2e-39|55.2|87/88|IF3_C| HM:PFM:REP 4->78|PF05198|6.9e-36|61.3|75/76|IF3_N| GO:PFM:NREP 4 GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF05198|IPR019814| GO:PFM GO:0006413|"GO:translational initiation"|PF05198|IPR019814| GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF00707|IPR019815| GO:PFM GO:0006413|"GO:translational initiation"|PF00707|IPR019815| RP:SCP:NREP 2 RP:SCP:REP 4->64|1tifA|7e-17|68.9|61/76|d.15.8.1| RP:SCP:REP 84->171|1tigA|5e-34|86.4|88/88|d.68.1.1| HM:SCP:REP 4->79|1tifA_|1.1e-29|55.3|76/76|d.15.8.1|1/1|Translation initiation factor IF3, N-terminal domain| HM:SCP:REP 83->172|2ifeA_|1.8e-34|56.7|90/0|d.68.1.1|1/1|Translation initiation factor IF3, C-terminal domain| OP:NHOMO 929 OP:NHOMOORG 906 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112211111111111111111112221111111111111111111111111111111111111111111-111111111111111112211111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111113111111111111111111111111111111111111111111-111111111111111111111111111-1111111111111111111111111111111-111111111111111111111111211111111111111111111111111111111111111111-111111111111111111111-1111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--111--1111111111111111111-11-11-111----1--11111-11111111111111111111111111111111-11111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111-11111-1111111111111111111111111111111111111111111-11111111111111111111111111111111 ------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------2--1-1-117111114112-211------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 152 STR:RPRED 87.9 SQ:SECSTR ###cccccGGGccccEEEEEcTTccEEEEEEHHHHHHHHHHTTcEEEEEETTccccEEEEEcHH##################cccEEEEEEETTccHHHHHHHHHHHHHHHHTTcEEEEEEEccTTccccHHHHHHHHHHHHTTcTTTcEEEEEEEEGGTEEEEEEEcccccc DISOP:02AL 1-5, 67-87, 171-173| PSIPRED cccccccccccccccEEEEEcccccEEccccHHHHHHHHHHcccEEEEEcccccccEEEEEccHHHHHHHHHHHHHHHHccccEEEEEEEEEccccccHHHHHHHHHHHHHHcccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccccc //