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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : lysS
DDBJ      :lysS         lysyl-tRNA synthetase
Swiss-Prot:SYK_BACSU    RecName: Full=Lysyl-tRNA synthetase;         EC=6.1.1.6;AltName: Full=Lysine--tRNA ligase;         Short=LysRS;

Homologs  Archaea  68/68 : Bacteria  879/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
b.40.4d.104.1
:499 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->497 3e9hA PDBj 0.0 78.7 %
:RPS:PDB   10->498 3e9hA PDBj 2e-91 77.9 %
:RPS:SCOP  9->151 1bbuA1  b.40.4.1 * 1e-30 50.0 %
:RPS:SCOP  158->497 1bbuA2  d.104.1.1 * e-123 54.4 %
:HMM:SCOP  8->150 1e1oA1 b.40.4.1 * 1.5e-52 50.0 %
:HMM:SCOP  158->498 1bbuA2 d.104.1.1 * 1e-123 43.1 %
:RPS:PFM   65->141 PF01336 * tRNA_anti 2e-05 40.3 %
:RPS:PFM   160->495 PF00152 * tRNA-synt_2 7e-62 44.4 %
:HMM:PFM   159->497 PF00152 * tRNA-synt_2 3.8e-98 34.9 315/323  
:HMM:PFM   65->142 PF01336 * tRNA_anti 2e-17 35.1 74/76  
:BLT:SWISS 1->499 SYK_BACSU 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB11858.1 GT:GENE lysS GT:PRODUCT lysyl-tRNA synthetase GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 88727..90226 GB:FROM 88727 GB:TO 90226 GB:DIRECTION + GB:GENE lysS GB:PRODUCT lysyl-tRNA synthetase GB:FUNCTION 16.2: Construct biomass (Anabolism) GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 12682299, 14623972; Product type e: enzyme GB:PROTEIN_ID CAB11858.1 GB:DB_XREF GOA:P37477 HSSP:1BBW InterPro:IPR018149 SubtiList:BG10144 UniProtKB/Swiss-Prot:P37477 GB:GENE:GENE lysS LENGTH 499 SQ:AASEQ MSQEEHNHEELNDQLQVRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTKEELEEKAIEVTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKSSDLGDLIGVTGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQIDLKPEWKRIHMVDAVKEATGVDFWEEVTVEQAREYAKEHEVEIKDSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREAGNDEAHLMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMRQR GT:EXON 1|1-499:0| SW:ID SYK_BACSU SW:DE RecName: Full=Lysyl-tRNA synthetase; EC=6.1.1.6;AltName: Full=Lysine--tRNA ligase; Short=LysRS; SW:GN Name=lysS; OrderedLocusNames=BSU00820; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Magnesium; Metal-binding; Nucleotide-binding;Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->499|SYK_BACSU|0.0|100.0|499/499| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| BL:PDB:NREP 1 BL:PDB:REP 10->497|3e9hA|0.0|78.7|483/484| RP:PDB:NREP 1 RP:PDB:REP 10->498|3e9hA|2e-91|77.9|484/484| RP:PFM:NREP 2 RP:PFM:REP 65->141|PF01336|2e-05|40.3|72/74|tRNA_anti| RP:PFM:REP 160->495|PF00152|7e-62|44.4|324/337|tRNA-synt_2| HM:PFM:NREP 2 HM:PFM:REP 159->497|PF00152|3.8e-98|34.9|315/323|tRNA-synt_2| HM:PFM:REP 65->142|PF01336|2e-17|35.1|74/76|tRNA_anti| GO:PFM:NREP 7 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF01336|IPR004365| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00152|IPR004364| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00152|IPR004364| GO:PFM GO:0005524|"GO:ATP binding"|PF00152|IPR004364| GO:PFM GO:0005737|"GO:cytoplasm"|PF00152|IPR004364| GO:PFM GO:0006412|"GO:translation"|PF00152|IPR004364| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00152|IPR004364| RP:SCP:NREP 2 RP:SCP:REP 9->151|1bbuA1|1e-30|50.0|142/144|b.40.4.1| RP:SCP:REP 158->497|1bbuA2|e-123|54.4|340/342|d.104.1.1| HM:SCP:REP 8->150|1e1oA1|1.5e-52|50.0|142/143|b.40.4.1|1/1|Nucleic acid-binding proteins| HM:SCP:REP 158->498|1bbuA2|1e-123|43.1|341/342|d.104.1.1|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 3265 OP:NHOMOORG 1144 OP:PATTERN 11313122222222221222333111111111111111111112212211222122222211222122 3321323222232233322-233333222223333333332-12222222222223221122233231--222222222223-32333222222222-13323232322322222222222222322212221222333333333232223332233222222223232232222222222223232222333344444434344444433333344433323333333333233333333333333233333323233232223322333233333333332222433333333333333333333333333423333333323345444444334333223333532333343233323232222222333224222211--1111111111111111111111111-111111111212322232332233112211-21111---111111111223211211111111-----------------111111-1--22222222222222222222222222222222222222222222222222222222222222222222222444443333333333343333334444434452212222222222222222222222222234333434332222333222232322333-3232333144443433334554445444-54444444445444444444443444433333333333333334343333433444444444444224333333433333333333333333333433333333333322222222222222222223333333333444344444444443334443343333332322244442222222232332333-23333312222323432233333323222233 4523554-A4322355644455555555555454444444444454325745464434665545555544556555434555555443-33262433332314466256654635582121232782B17N316571221423463221232242645432733433564645535334V5554452893674456444 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 491 STR:RPRED 98.4 SQ:SECSTR ########cccTTHHHHHHHHHHHHHHTTccTTcccccccccHHHHHHHHTTccHHHHHHHccEEEEEEEEEEEEccccEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHccTTcEEEEEEEEEEcTTccEEEEEEEEEEEEccccccccccHHHccHHHHHHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHTTcEEcccccEEcccccccccccEEEETTTTEEEEEccccHHHHHHHHHTTccEEEEEEEEEccccccTTcccEEEEEEEEEETccHHHHHHHHHHHHHHHHHHHHcccEEEETTEEEEcccccEEEEHHHHHHHHTcccTTccccHHHHHHHHHHTTccccTTccHHHHHHHHHHHHTGGGccccEEEEcccGGGcTTcccccccTTcccEEEEEETTEEEEEEEEccccHHHHHHHHHHHHHHHHTTcTTcccccHHHHHHHHTccccEEEEEEEHHHHHHHHHTcccGGGcccccccccc DISOP:02AL 1-6, 8-11| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccHHHcccEEEEEEEEEEEcccccEEEEEEEcccEEEEEEEEcccccHHHHHHHHcccccEEEEEEEEEEEcccccEEEEEEEEEEEEcccccccccccccccHHHHHHccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccEEEcccccccccccEEEEEccccEEEEEccHHHHHHHHHHcccccEEEEEEEEEccccccccccEEEEccHHHccccHHHHHHHHHHHHHHHHHHHHccccEEccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccEEEEcccccccHHHccccccccEEEEEEEEEccEEEEccHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccEEEcccccccc //