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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : rbsB
DDBJ      :rbsB         ribose ABC transporter (ribose-binding lipoprotein)
Swiss-Prot:RBSB_BACSU   RecName: Full=D-ribose-binding protein;Flags: Precursor;

Homologs  Archaea  0/68 : Bacteria  523/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:305 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   39->305 2ioyA PDBj 4e-85 59.2 %
:RPS:PDB   39->301 2driA PDBj 7e-55 54.0 %
:RPS:SCOP  39->305 1ba2A  c.93.1.1 * 5e-60 53.2 %
:HMM:SCOP  37->305 2fvyA1 c.93.1.1 * 1.5e-89 46.5 %
:RPS:PFM   39->288 PF00532 * Peripla_BP_1 2e-39 42.0 %
:HMM:PFM   39->280 PF00532 * Peripla_BP_1 4.7e-26 31.4 236/279  
:BLT:SWISS 1->305 RBSB_BACSU e-168 100.0 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB15613.1 GT:GENE rbsB GT:PRODUCT ribose ABC transporter (ribose-binding lipoprotein) GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 3706145..3707062 GB:FROM 3706145 GB:TO 3707062 GB:DIRECTION + GB:GENE rbsB GB:PRODUCT ribose ABC transporter (ribose-binding lipoprotein) GB:FUNCTION 16.1: Circulate GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 7921236; Product type t : transporter GB:PROTEIN_ID CAB15613.1 GB:DB_XREF GOA:P36949 HSSP:2DRI InterPro:IPR001761 SubtiList:BG10881 UniProtKB/Swiss-Prot:P36949 GB:GENE:GENE rbsB LENGTH 305 SQ:AASEQ MKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKEFTIGLSVSTLNNPFFVSLKKGIEKEAKKRGMKVIIVDAQNDSSKQTSDVEDLIQQGVDALLINPTDSSAISTAVESANAVGVPVVTIDRSAEQGKVETLVASDNVKGGEMAAAFIADKLGKGAKVAELEGVPGASATRERGSGFHNIADQKLQVVTKQSADFDRTKGLTVMENLLQGHPDIQAVFAHNDEMALGALEAINSSGKDILVIGFDGNKDALASIKDRKLSATVAQQPELIGKLATEAADDILHGKKVQKTISAPLKLETQK GT:EXON 1|1-305:0| SW:ID RBSB_BACSU SW:DE RecName: Full=D-ribose-binding protein;Flags: Precursor; SW:GN Name=rbsB; OrderedLocusNames=BSU35960; SW:KW Cell membrane; Complete proteome; Lipoprotein; Membrane; Palmitate;Signal; Sugar transport; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->305|RBSB_BACSU|e-168|100.0|305/305| GO:SWS:NREP 4 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0008643|"GO:carbohydrate transport"|Sugar transport| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 1 TM:REGION 4->26| BL:PDB:NREP 1 BL:PDB:REP 39->305|2ioyA|4e-85|59.2|267/274| RP:PDB:NREP 1 RP:PDB:REP 39->301|2driA|7e-55|54.0|263/271| RP:PFM:NREP 1 RP:PFM:REP 39->288|PF00532|2e-39|42.0|238/261|Peripla_BP_1| HM:PFM:NREP 1 HM:PFM:REP 39->280|PF00532|4.7e-26|31.4|236/279|Peripla_BP_1| RP:SCP:NREP 1 RP:SCP:REP 39->305|1ba2A|5e-60|53.2|267/271|c.93.1.1| HM:SCP:REP 37->305|2fvyA1|1.5e-89|46.5|269/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 2716 OP:NHOMOORG 525 OP:PATTERN -------------------------------------------------------------------- 2551B-12335-----------11-E-------222-3752--3442-3541779--311-13293ACD811----12----7-----2223-3-----113-2-4-318--------------------------22244---B1-1------------------12-31------------14---98-4863333333433633367899644243BC-2451112123K111111111111111-1123221-11131-23311-11222212112222313311222221222221111--1111111211--1111347-5D-----1-212631145247421-3-211--122-D2-6746521---32332-----8-85A--------6676677576G------2216K--QLL9OMPTUOVS21---388545523---------87811--2-------------------------------1-1--11--A9999A7333299EF75663977B1441--5545-4--43439P-------43-------------2-1----1-14------------------A1----------------------------9883-52-41A311121121121--311-2-------------EADB5B7AAAAABBB98-AA7AAAC9B9AB9BB8BBAIIH784467676687676667657D85865784-ADCCDCDCCDDD---------------53E555534133346697----------611111232A-22221776----------767788888859DC-111-11111------21---------------12-------------111---------1274-5D565-3- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 282 STR:RPRED 92.5 SQ:SECSTR #######################cEEETTTcccEccEEEEEEEEcccccHHHHHHHHHHHHHHHHHTcEEEEEEcTTcHHHHHHHHHHHTTTTEEEEEEccccTTTTHHHHHHHHHTTccEEEEccccccccccEEEEEcHHHHHHHHHHHHHHHHcTTcEEEEEEccTTcHHHHHHHHHHHHHHHHTcEEEEEEEcTTcHHHHHHHHHHHHHHcTTccEEEEccHHHHHHHHHHHHHHTccccEEEEEccHHHHHHHHTTcccEEEEccHHHHHHHHHHHHHHHHTTcccccEEEEccEEEEcc DISOP:02AL 27-34| PSIPRED cHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHccccEEEEEcccccccccEEEEccHHHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHcccccccEEEEccEEEEEc //