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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : rplR
DDBJ      :rplR         ribosomal protein L18
Swiss-Prot:RL18_BACSU   RecName: Full=50S ribosomal protein L18;

Homologs  Archaea  0/68 : Bacteria  891/915 : Eukaryota  22/199 : Viruses  0/175   --->[See Alignment]
c.55.4
:120 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->120 1ovyA PDBj 1e-39 77.3 %
:RPS:PDB   4->120 3bboQ PDBj 7e-36 58.1 %
:RPS:SCOP  6->120 1vs6O1  c.55.4.1 * 4e-37 52.6 %
:HMM:SCOP  24->120 1ovyA_ c.55.4.1 * 1.7e-43 72.2 %
:RPS:PFM   11->120 PF00861 * Ribosomal_L18p 5e-24 64.5 %
:HMM:PFM   7->120 PF00861 * Ribosomal_L18p 1.8e-45 54.4 114/119  
:BLT:SWISS 1->120 RL18_BACSU 1e-63 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB11908.2 GT:GENE rplR GT:PRODUCT ribosomal protein L18 GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 142974..143336 GB:FROM 142974 GB:TO 143336 GB:DIRECTION + GB:GENE rplR GB:PRODUCT ribosomal protein L18 GB:FUNCTION 16.2: Construct biomass (Anabolism) GB:NOTE Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; PubMedId: 12682299; Product type s: structure GB:PROTEIN_ID CAB11908.2 GB:DB_XREF GOA:P46899 HSSP:1ILY InterPro:IPR004389 SubtiList:BG11409 UniProtKB/Swiss-Prot:P46899 GB:GENE:GENE rplR LENGTH 120 SQ:AASEQ MITKTSKNAARLKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDLNVESTGDTSAATKVGELVAKRAAEKGISDVVFDRGGYLYHGRVKALADAAREAGLKF GT:EXON 1|1-120:0| SW:ID RL18_BACSU SW:DE RecName: Full=50S ribosomal protein L18; SW:GN Name=rplR; OrderedLocusNames=BSU01320; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->120|RL18_BACSU|1e-63|100.0|120/120| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| BL:PDB:NREP 1 BL:PDB:REP 24->120|1ovyA|1e-39|77.3|97/97| RP:PDB:NREP 1 RP:PDB:REP 4->120|3bboQ|7e-36|58.1|117/122| RP:PFM:NREP 1 RP:PFM:REP 11->120|PF00861|5e-24|64.5|110/118|Ribosomal_L18p| HM:PFM:NREP 1 HM:PFM:REP 7->120|PF00861|1.8e-45|54.4|114/119|Ribosomal_L18p| GO:PFM:NREP 4 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00861|IPR005484| GO:PFM GO:0005622|"GO:intracellular"|PF00861|IPR005484| GO:PFM GO:0005840|"GO:ribosome"|PF00861|IPR005484| GO:PFM GO:0006412|"GO:translation"|PF00861|IPR005484| RP:SCP:NREP 1 RP:SCP:REP 6->120|1vs6O1|4e-37|52.6|114/117|c.55.4.1| HM:SCP:REP 24->120|1ovyA_|1.7e-43|72.2|97/0|c.55.4.1|1/1|Translational machinery components| OP:NHOMO 938 OP:NHOMOORG 913 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111-------11111111111111111111111111111111111111111111111111111111111111111-111111-1-11-1111111111111111111111111111111111111111111111111111-11111111111111111-11111111-1111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111112111111111111111111-11111--111111-1111111111111111-1 11------1---------------------------------------------------------------------------------------------------2------------------------------------------------------1-----------1111A111124362-21------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 117 STR:RPRED 97.5 SQ:SECSTR ###cccccccGGGTccccccGGGGcccccccEEEEccccEEEEEEccTTccEEEEEEHHHHHHTTcccccHHHHHHHHHHcccHHHHTccccccccccccccccTTHHHHHHHTTTTccc DISOP:02AL 120-121| PSIPRED ccccccHHHHHHHHHHHHHHHHHccccccEEEEEEccccEEEEEEEccccEEEEEEEHHHHHHcccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHccccc //