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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : trmE
DDBJ      :trmE         tRNA modification GTPase
Swiss-Prot:MNME_BACSU   RecName: Full=tRNA modification GTPase mnmE;         EC=3.6.-.-;

Homologs  Archaea  8/68 : Bacteria  908/915 : Eukaryota  174/199 : Viruses  0/175   --->[See Alignment]
a.118.1a.24.25b.34.4d.250.1
:459 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->459 1xzpA PDBj 5e-90 41.4 %
:RPS:PDB   70->385 2e87A PDBj 1e-26 16.3 %
:RPS:SCOP  1->124 1xzpA3  d.250.1.2 * 8e-47 49.6 %
:RPS:SCOP  123->316 1ahjB  b.34.4.4 * 2e-28 9.9 %
:RPS:SCOP  333->456 2iolA1  a.118.1.14 * 5e-17 18.2 %
:HMM:SCOP  1->124 1xzpA3 d.250.1.2 * 6.2e-40 50.4 %
:HMM:SCOP  125->459 1xzpA1 a.24.25.1 * 9.5e-59 44.3 %
:RPS:PFM   3->124 PF10396 * TrmE_N 1e-28 52.1 %
:RPS:PFM   233->336 PF01926 * MMR_HSR1 9e-11 37.5 %
:HMM:PFM   3->124 PF10396 * TrmE_N 5.5e-44 50.4 115/115  
:HMM:PFM   233->336 PF01926 * MMR_HSR1 5.2e-26 42.3 104/108  
:HMM:PFM   203->246 PF01637 * Arch_ATPase 0.00023 32.5 40/234  
:BLT:SWISS 1->459 MNME_BACSU 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB16139.1 GT:GENE trmE GT:PRODUCT tRNA modification GTPase GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(4211510..4212889) GB:FROM 4211510 GB:TO 4212889 GB:DIRECTION - GB:GENE trmE GB:PRODUCT tRNA modification GTPase GB:FUNCTION 16.6: Maintain 16.2: Construct biomass (Anabolism) GB:NOTE Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; PubMedId: 15522079, 15616586; Product type e: enzyme GB:PROTEIN_ID CAB16139.1 GB:DB_XREF GOA:P25811 HSSP:1MKY InterPro:IPR004520 SubtiList:BG10060 UniProtKB/Swiss-Prot:P25811 GB:GENE:GENE trmE LENGTH 459 SQ:AASEQ MDTIAAISTPMGEGAIAIVRLSGPEAIQIADKIYKGPKGKTLSSVESHTIHYGHIVDRPSDRVVEEVMVSVLKAPRTFTREDVIEINCHGGIVTVNQVLQLALREGARLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMNVAMNQMEGRLSALVRRLRSEILETLAHVEVNIDYPEYDDVEEMTHQILVEKATAVKKEIETLLRTSEQGKILREGLSTVIIGRPNVGKSSLLNSLVHEAKAIVTDIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGVERSRQVLKEADLILLVLNYSEELSEEDVKLFEAVEGMDVIVILNKTDLEPKIDTERVRELANGRPVVTTSLLKEEGINDLEEAIQSLFYTGAIESGDLTYVSNTRHITILQQAKRAIEDALSGIEQDVPIDMVQIDLTRCWELLGEIIGDSVHESLIDQLFSQFCLGK GT:EXON 1|1-459:0| SW:ID MNME_BACSU SW:DE RecName: Full=tRNA modification GTPase mnmE; EC=3.6.-.-; SW:GN Name=mnmE; Synonyms=thdF, trmE; OrderedLocusNames=BSU41020; SW:KW Complete proteome; Cytoplasm; GTP-binding; Hydrolase; Magnesium;Metal-binding; Nucleotide-binding; Potassium; tRNA processing. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->459|MNME_BACSU|0.0|100.0|459/459| GO:SWS:NREP 6 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0005525|"GO:GTP binding"|GTP-binding| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| BL:PDB:NREP 1 BL:PDB:REP 1->459|1xzpA|5e-90|41.4|444/456| RP:PDB:NREP 1 RP:PDB:REP 70->385|2e87A|1e-26|16.3|307/353| RP:PFM:NREP 2 RP:PFM:REP 3->124|PF10396|1e-28|52.1|117/117|TrmE_N| RP:PFM:REP 233->336|PF01926|9e-11|37.5|104/105|MMR_HSR1| HM:PFM:NREP 3 HM:PFM:REP 3->124|PF10396|5.5e-44|50.4|115/115|TrmE_N| HM:PFM:REP 233->336|PF01926|5.2e-26|42.3|104/108|MMR_HSR1| HM:PFM:REP 203->246|PF01637|0.00023|32.5|40/234|Arch_ATPase| GO:PFM:NREP 2 GO:PFM GO:0005525|"GO:GTP binding"|PF01926|IPR002917| GO:PFM GO:0005622|"GO:intracellular"|PF01926|IPR002917| RP:SCP:NREP 3 RP:SCP:REP 1->124|1xzpA3|8e-47|49.6|117/117|d.250.1.2| RP:SCP:REP 123->316|1ahjB|2e-28|9.9|191/212|b.34.4.4| RP:SCP:REP 333->456|2iolA1|5e-17|18.2|110/127|a.118.1.14| HM:SCP:REP 1->124|1xzpA3|6.2e-40|50.4|117/0|d.250.1.2|1/1|Folate-binding domain| HM:SCP:REP 125->459|1xzpA1|9.5e-59|44.3|174/0|a.24.25.1|1/1|TrmE connector domain| OP:NHOMO 2427 OP:NHOMOORG 1090 OP:PATTERN ----------------1------------------1---------------1-11--1-12------- 333112222212-221111-1111211111111111111112112121111122221122111111-11121-111111113132323333333222123222223233322222222222222223333433322333331112134334422333332333343322232333333333332222233233333333333333333333333333333323333333333333333332233333333323322322332223333222322223333333333333333333333333333333334333333332333344344333333333344443333444223333433444453244454333243222233333223323332333322222222222-2222222222322222222222222222222222222222222222232222222223332222233333333333333332331222232222222222222222222222222222222222222222222222222222222222222222223223233324324423443223334445522223134223222222222222222222332322222223332222222222333222322222212333222222222222222222222222-22222222222222222222222222222221122112222222222222222222222222222222233333222223322222222222222222323333222222223222222222222223333333332222222222222222222222223333322322222223331221232222223-33323222222322333334444444444222 22--2211411----11111111111111111111111111111111111111121111111111111111111111-1111111111-1311111----111111-2312111113-11-11121111292--12-1111111-111-111121---113-1211-111211113323F3334432131332431324 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 452 STR:RPRED 98.5 SQ:SECSTR cccEEEEcccccccccEEEEEEcccHHHHHHTTEE#####EccccccTccEEEEEcc##ccccccEEEEcTTTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGcccccccccEEEEEccTTccHHHHHHHHcccccEEEccTTccccEEEEEEEETTEEEEEEEcTTTcccccTTccHHHHHHHHGGGGTccEEEEEEcTTcTTcccHHHHHHHTTTccEEEEEccTTTccHHHHHHHHHHHTTcccEEccTTTTcTHHHHHHHHHHHHHHHHHHcccTTccccTTcccccTTccccccccHHHHHHHHTHHHHTTcHTTcHHHHHHHHHHTcccHHHHHHHTTccTTc DISOP:02AL 208-219| PSIPRED cccEEEEccccccccEEEEEEcHHHHHHHHHHHHccccccccccccccEEEEEEEEEcccccEEccEEEEEEccccEEccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHcccccEEcccccccEEEEEEEEEEccEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHHHHHHHccEEEEEEccccccccHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccc //