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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : truA
DDBJ      :truA         pseudouridylate synthase I
Swiss-Prot:TRUA_BACSU   RecName: Full=tRNA pseudouridine synthase A;         EC=5.4.99.12;AltName: Full=tRNA-uridine isomerase I;AltName: Full=tRNA pseudouridylate synthase I;

Homologs  Archaea  43/68 : Bacteria  883/915 : Eukaryota  133/199 : Viruses  0/175   --->[See Alignment]
d.265.1
:247 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->245 1vs3A PDBj 3e-38 39.6 %
:RPS:PDB   1->247 1dj0A PDBj 1e-78 36.7 %
:RPS:SCOP  1->247 1dj0A  d.265.1.1 * 5e-79 36.7 %
:HMM:SCOP  1->247 1dj0A_ d.265.1.1 * 9.3e-85 46.1 %
:RPS:PFM   7->88 PF01416 * PseudoU_synth_1 4e-10 48.1 %
:HMM:PFM   7->105 PF01416 * PseudoU_synth_1 1.6e-13 40.7 81/105  
:HMM:PFM   144->246 PF01416 * PseudoU_synth_1 3.7e-27 35.3 102/105  
:BLT:SWISS 1->247 TRUA_BACSU e-146 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB11924.2 GT:GENE truA GT:PRODUCT pseudouridylate synthase I GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 152937..153680 GB:FROM 152937 GB:TO 153680 GB:DIRECTION + GB:GENE truA GB:PRODUCT pseudouridylate synthase I GB:FUNCTION 16.6: Maintain 16.2: Construct biomass (Anabolism) GB:NOTE Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; PubMedId: 15353568; Product type e: enzyme GB:PROTEIN_ID CAB11924.2 GB:DB_XREF GOA:P70973 HSSP:1DJ0 InterPro:IPR020094 SubtiList:BG11992 UniProtKB/Swiss-Prot:P70973 GB:GENE:GENE truA LENGTH 247 SQ:AASEQ MRLKCTISYDGHLFNGYQVQPGKRTVQDELEKALAVLHKSKDRIPVVSSGRTDSGVHAAGQVIHFDTPLSIPAERWPYALNALLPDDIAVKQAEIADDGFHARFSAVKKEYRYFVYTEKHPDVFKRHYAYHFSYRLNVQDMREAAKHLIGTHDFTSFCAAKTEVQDKVRTIYELDWTETADGLQMRITGSGFLYNMVRIIAGTLLDAGIGKISPDEVKSMLEAKDREAAGRTAPGHGLYLWNVYYDN GT:EXON 1|1-247:0| SW:ID TRUA_BACSU SW:DE RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12;AltName: Full=tRNA-uridine isomerase I;AltName: Full=tRNA pseudouridylate synthase I; SW:GN Name=truA; Synonyms=ybaH; OrderedLocusNames=BSU01480; SW:KW Complete proteome; Isomerase; tRNA processing. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->247|TRUA_BACSU|e-146|100.0|247/247| GO:SWS:NREP 2 GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| BL:PDB:NREP 1 BL:PDB:REP 2->245|1vs3A|3e-38|39.6|240/249| RP:PDB:NREP 1 RP:PDB:REP 1->247|1dj0A|1e-78|36.7|245/264| RP:PFM:NREP 1 RP:PFM:REP 7->88|PF01416|4e-10|48.1|77/112|PseudoU_synth_1| HM:PFM:NREP 2 HM:PFM:REP 7->105|PF01416|1.6e-13|40.7|81/105|PseudoU_synth_1| HM:PFM:REP 144->246|PF01416|3.7e-27|35.3|102/105|PseudoU_synth_1| GO:PFM:NREP 4 GO:PFM GO:0001522|"GO:pseudouridine synthesis"|PF01416|IPR020097| GO:PFM GO:0003723|"GO:RNA binding"|PF01416|IPR020097| GO:PFM GO:0009451|"GO:RNA modification"|PF01416|IPR020097| GO:PFM GO:0009982|"GO:pseudouridine synthase activity"|PF01416|IPR020097| RP:SCP:NREP 1 RP:SCP:REP 1->247|1dj0A|5e-79|36.7|245/264|d.265.1.1| HM:SCP:REP 1->247|1dj0A_|9.3e-85|46.1|245/264|d.265.1.1|1/1|Pseudouridine synthase| OP:NHOMO 1235 OP:NHOMOORG 1059 OP:PATTERN ------------------1111111111111111111-1111-111111111111111111-1--1-- 111-111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111-111111112211112-1111111-11111211111111111111111111111111111111111111111111111111111111111111111-111-2222222222222211111122211111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111321122222221211211222232111-321111111121111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111--1111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111212111111111111111111122222121111111111111111111111111111111111111111111111111111-111111--111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111-11111111111111111111111111111111111-111111111111111111-1111111111111111---1--11----111--1111111111111111 --11121-211--1--------1---------------------------11-1--------111-1111111111111111111111-1-1-1211--1---22211623222311221-22135222262-222111222222121222-1122222--1-2111222811-22323I443123124-344221224 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 247 STR:RPRED 100.0 SQ:SECSTR EEEEEEEEEccTTccccccTTccccHHHHHHHHHHHHHTccTcccEEEcccccTTcEEEEEEEEEEEcccccHHHHHHHHHHTccTTEEEEEEEEccTTccTTTTccEEEEEEEEEcccccccTTTTccEEccccccHHHHHHHHGGGcEEEEcGGGccTTccccccEEEEEEEEEEEETTEEEEEEEEccccTTHHHHHHHHHHHHHTTcccTTHHHHHHHHccGGGcccccccTTEEEEEEEccG DISOP:02AL 246-248| PSIPRED cEEEEEEEEccccccccccccccccHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHccEEEEEEcccccHHHHHHHHHHHccccEEEEEEEEccccccccEEcccEEEEEEEEcccccccHHccEEEEEcccccHHHHHHHHHHHccccccHHHHHccccccccEEEEEEEEEEEcccEEEEEEEEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccEEEEEEccc //