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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : ybaF
DDBJ      :ybaF         putative permease
Swiss-Prot:YBAF_BACSU   RecName: Full=Putative permease ybaF;

Homologs  Archaea  11/68 : Bacteria  236/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:265 amino acids
:PSIPRED
:RPS:PFM   17->230 PF02361 * CbiQ 2e-29 42.0 %
:HMM:PFM   14->237 PF02361 * CbiQ 4.8e-69 41.0 217/224  
:BLT:SWISS 1->247 YBAF_BACSU e-119 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB11923.2 GT:GENE ybaF GT:PRODUCT putative permease GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 152130..152927 GB:FROM 152130 GB:TO 152927 GB:DIRECTION + GB:GENE ybaF GB:PRODUCT putative permease GB:FUNCTION 16.1: Circulate GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId: 15849754, 16850406; Product type pt: putative transporter GB:PROTEIN_ID CAB11923.2 GB:DB_XREF GOA:P70972 InterPro:IPR003339 SubtiList:BG11990 UniProtKB/Swiss-Prot:P70972 GB:GENE:GENE ybaF LENGTH 265 SQ:AASEQ MMDSMIIGKYVPGTSLVHRLDPRTKLITIFLFVCIVFLANNVQTYALLGLFTIGVVSLTRVPFSFLMKGLKPIIWIVLFTFLLHILMTHEGPIIFQIGFFKVYEGGLVQGIFISLRFVYLILITTLLTLTTTPIEITDGMEQLLNPLKKLKLPVHELALMMSISLRFIPTLMEETDKIMKAQMARGVDFTSGPVKERVKAIVPLLVPLFVSAFKRAEELAVAMEARGYQGGEGRTKYRKLVWTGKDTSVIVSLIVLAALLFFLRA GT:EXON 1|1-265:0| SW:ID YBAF_BACSU SW:DE RecName: Full=Putative permease ybaF; SW:GN Name=ybaF; OrderedLocusNames=BSU01470; SW:KW Cell membrane; Complete proteome; Membrane; Transmembrane; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->247|YBAF_BACSU|e-119|100.0|247/265| GO:SWS:NREP 4 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 4 TM:REGION 31->53| TM:REGION 65->87| TM:REGION 109->131| TM:REGION 244->265| SEG 120->137|lilittlltltttpieit| SEG 143->153|llnplkklklp| SEG 248->263|svivslivlaallffl| RP:PFM:NREP 1 RP:PFM:REP 17->230|PF02361|2e-29|42.0|205/213|CbiQ| HM:PFM:NREP 1 HM:PFM:REP 14->237|PF02361|4.8e-69|41.0|217/224|CbiQ| GO:PFM:NREP 3 GO:PFM GO:0006824|"GO:cobalt ion transport"|PF02361|IPR003339| GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF02361|IPR003339| GO:PFM GO:0015087|"GO:cobalt ion transmembrane transporter activity"|PF02361|IPR003339| OP:NHOMO 281 OP:NHOMOORG 247 OP:PATTERN ----------------1----------------------------1---1333-1-1-111------- ----------------------------------------------1-----1------------------111111132223---------------------------------------------------------------------------------------------------------11--1111111111111111111111111111111122222222-11111111111111111111111111111111111111111131111111111211111111111111111111111111111111111211111111111111111111111111111112--1222222121121111------------------------------------------------------------------1-------1---------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-------1------------------------------------1111-1-11111111111111111111111111111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cccccccccEEccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHc //