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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : ybbR
DDBJ      :ybbR         conserved hypothetical protein
Swiss-Prot:YBBR_BACSU   RecName: Full=YbbR-like domain-containing protein ybbR;Flags: Precursor;

Homologs  Archaea  0/68 : Bacteria  172/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:483 amino acids
:PSIPRED
:RPS:PFM   237->312 PF07949 * YbbR 1e-07 34.2 %
:HMM:PFM   55->135 PF07949 * YbbR 3.9e-14 32.0 75/82  
:HMM:PFM   143->228 PF07949 * YbbR 2.2e-18 31.2 80/82  
:HMM:PFM   237->316 PF07949 * YbbR 1.1e-19 38.8 80/82  
:HMM:PFM   339->394 PF07949 * YbbR 1.9e-07 22.6 53/82  
:BLT:SWISS 1->410 YBBR_BACSU 0.0 100.0 %
:TM
:REPEAT 2|120->212|213->303
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB11952.2 GT:GENE ybbR GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 197027..198478 GB:FROM 197027 GB:TO 198478 GB:DIRECTION + GB:GENE ybbR GB:PRODUCT conserved hypothetical protein GB:NOTE Evidence 4: Homologs of previously reported genes of unknown function; PubMedId: 16236721 GB:PROTEIN_ID CAB11952.2 GB:DB_XREF InterPro:IPR012505 SubtiList:BG12703 UniProtKB/TrEMBL:O34659 GB:GENE:GENE ybbR LENGTH 483 SQ:AASEQ MDKFLNNRWAVKIIALLFALLLYVAVNSNQAPTPKKPGESFFPTSTTDEATLTDIPVKAYYDDENYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYADMEHLKTGTHKVELKAKNVSDGLTISINPSVTTVTIQERTTKSFPVEVEYYNKSKMKKGYSPEQPIVSPKNVQITGSKNVIDNISLVKASVNLENADETIEKEAKVTVYDKDGNALPVDVEPSVIKITVPVTSPSKKVPFKIERTGSLPDGVSIANIESSPSEVTVYGSQDVLDSLEFIDGVSLDLSKINKDSDIEADIPLPDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQNIEFLDPESQAIDVTAKGSPTNINKLKKSDIELYVNVSDLEDGEHSVKLEVNGPQNVTWSLGRKNAKIKLTSKKSNTSTNDNSSNTSGNQDTDKQTNDQKNNQQEDTKNTDKNNNDQNQDGNKDQNQDQDEDESTANSQSSSE GT:EXON 1|1-483:0| SW:ID YBBR_BACSU SW:DE RecName: Full=YbbR-like domain-containing protein ybbR;Flags: Precursor; SW:GN Name=ybbR; OrderedLocusNames=BSU01760; SW:KW Complete proteome; Repeat; Signal. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->410|YBBR_BACSU|0.0|100.0|410/483| TM:NTM 1 TM:REGION 7->28| NREPEAT 1 REPEAT 2|120->212|213->303| SEG 13->22|iiallfalll| SEG 411->473|tskksntstndnssntsgnqdtdkqtndqknnqqedtkntdknnndqnqdgnkdqnqdqdede| RP:PFM:NREP 1 RP:PFM:REP 237->312|PF07949|1e-07|34.2|76/81|YbbR| HM:PFM:NREP 4 HM:PFM:REP 55->135|PF07949|3.9e-14|32.0|75/82|YbbR| HM:PFM:REP 143->228|PF07949|2.2e-18|31.2|80/82|YbbR| HM:PFM:REP 237->316|PF07949|1.1e-19|38.8|80/82|YbbR| HM:PFM:REP 339->394|PF07949|1.9e-07|22.6|53/82|YbbR| OP:NHOMO 172 OP:NHOMOORG 172 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------11111111111111111111111111111111111111111111111111111111111111111-1111111111111111111-111111111111111111111111111111111111111111111111111111111111111--111111111-11--11-111-1-111111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccHHHHcccHHHHHHHHHHHHHEEEEEcccccEEEccccccccEEcccccEEEEEEEEEEEcccccEEcccccEEEEEEEEcHHHHcccccccEEEEEEEcccccccEEEEEEEEEcccccEEEEEEccEEEEEEEEEEEEEEEEEEEEcccccccccEEEEEEEccccEEEEEcHHHHHccccEEEEEEEcccccccEEEEEEEEEEcccccEEEEEEcccEEEEEEEEEcccEEEEEEEEEEEEccccEEEEEEEEcccEEEEEEcHHHHcccccEEEEEEEEEcccccEEEEEEEEcccccEEEcccEEEEEEEEEccEEEEEEEccEEEEccccccEEEEEEccccEEEEEEEEcHHHHcccccccEEEEEEEEccccccEEEEEEEEcccccEEEEccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //