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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yckC
DDBJ      :yckC         putative integral inner membrane protein
Swiss-Prot:YCKC_BACSU   RecName: Full=Uncharacterized protein yckC;AltName: Full=ORF3;

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:151 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   7->93 PF06271 * RDD 2e-05 34.5 %
:HMM:PFM   6->128 PF06271 * RDD 2.1e-26 32.5 123/133  
:BLT:SWISS 1->151 YCKC_BACSU 5e-69 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB12133.1 GT:GENE yckC GT:PRODUCT putative integral inner membrane protein GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 369236..369691 GB:FROM 369236 GB:TO 369691 GB:DIRECTION + GB:GENE yckC GB:PRODUCT putative integral inner membrane protein GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId: 15849754, 16850406; Product type pm: putative membrane component GB:PROTEIN_ID CAB12133.1 GB:DB_XREF GOA:P42401 InterPro:IPR010432 SubtiList:BG11179 UniProtKB/Swiss-Prot:P42401 GB:GENE:GENE yckC LENGTH 151 SQ:AASEQ MNIYKPAGFWIRLGAALLDYIIVSVPLLLIYWLITGKDPNDSMFISLVVLLYSILLPMFWRGYLIGKRICGIRIVKKDGSQVSLLTMFLRVIVAGLVYCITFGLGLIASLILIAVREDKRTLHDLIAGTYVTYATPGEEELNADEEIRKSE GT:EXON 1|1-151:0| SW:ID YCKC_BACSU SW:DE RecName: Full=Uncharacterized protein yckC;AltName: Full=ORF3; SW:GN Name=yckC; OrderedLocusNames=BSU03390; SW:KW Cell membrane; Complete proteome; Membrane; Transmembrane. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->151|YCKC_BACSU|5e-69|100.0|151/151| GO:SWS:NREP 3 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| TM:NTM 3 TM:REGION 12->34| TM:REGION 43->65| TM:REGION 88->110| SEG 45->56|islvvllysill| SEG 103->114|glgliaslilia| RP:PFM:NREP 1 RP:PFM:REP 7->93|PF06271|2e-05|34.5|87/132|RDD| HM:PFM:NREP 1 HM:PFM:REP 6->128|PF06271|2.1e-26|32.5|123/133|RDD| OP:NHOMO 8 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------1---1---111----------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 139-151| PSIPRED cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccEEEEEccccccccccccccccc //