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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yddM
DDBJ      :yddM         putative helicase; mobile element region
Swiss-Prot:YDDM_BACSU   RecName: Full=Uncharacterized protein yddM;

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:313 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   145->210 PF11368 * DUF3169 3.7e-05 28.1 64/248  
:HMM:PFM   184->284 PF05384 * DegS 5.4e-05 24.8 101/159  
:BLT:SWISS 1->313 YDDM_BACSU e-158 100.0 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB12310.1 GT:GENE yddM GT:PRODUCT putative helicase; mobile element region GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 548710..549651 GB:FROM 548710 GB:TO 549651 GB:DIRECTION + GB:GENE yddM GB:PRODUCT putative helicase; mobile element region GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme GB:PROTEIN_ID CAB12310.1 GB:DB_XREF GOA:P96650 SubtiList:BG12120 UniProtKB/Swiss-Prot:P96650 GB:GENE:GENE yddM LENGTH 313 SQ:AASEQ MGENMFKKEKVTEYIWTILIPTIITFIISWVGSYYNGTSTVSIGQPTKVSGQYITPINISPYHDIKELRITFPQKLDVKQISSNEPINVKSDKNNIGVESNSTFEIAKIVENNSVQLLITTQKKLNDKEIRIDKNGNNISVNYESQIVNPAKKQLINLIITSSIYFIMLNILALIMNKRWDKYYAKMKNEIKEFEDNAKDLDKKSKKKSEELSELRKTLNQAFEETDRIKYHEKKKQILLLAKLNDYKKELTFWRNTIRKVLYELPDGDKKADKLIGTVTSSLKTYGTVEKNEHDYESLKVAAALLNDSDKRS GT:EXON 1|1-313:0| SW:ID YDDM_BACSU SW:DE RecName: Full=Uncharacterized protein yddM; SW:GN Name=yddM; OrderedLocusNames=BSU05030; SW:KW Cell membrane; Complete proteome; Membrane; Transmembrane. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->313|YDDM_BACSU|e-158|100.0|313/313| GO:SWS:NREP 3 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| COIL:NAA 36 COIL:NSEG 1 COIL:REGION 187->222| TM:NTM 2 TM:REGION 12->34| TM:REGION 155->177| SEG 15->28|iwtiliptiitfii| SEG 199->215|kdldkkskkkseelsel| HM:PFM:NREP 2 HM:PFM:REP 145->210|PF11368|3.7e-05|28.1|64/248|DUF3169| HM:PFM:REP 184->284|PF05384|5.4e-05|24.8|101/159|DegS| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-8, 85-90, 92-94, 194-217, 309-313| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccEEEcccccccccHHHHHccccccccHHHccccccEEEEccccccccccccccHHHHHHccccEEEEEEEcccccccEEEEEccccEEEEEEHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccc //