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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yfkA
DDBJ      :yfkA         putative Fe-S oxidoreductase, radical SAM superfamily
Swiss-Prot:YFKA_BACSU   RecName: Full=Putative protein yfkA;

Homologs  Archaea  0/68 : Bacteria  57/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:373 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   42->278 3chvA PDBj 5e-14 7.8 %
:RPS:SCOP  24->248 1tv7A  c.1.28.3 * 7e-09 19.2 %
:HMM:SCOP  30->330 1tv8A_ c.1.28.3 * 3.1e-26 22.8 %
:RPS:PFM   221->371 PF08756 * YfkB 7e-70 77.5 %
:HMM:PFM   221->372 PF08756 * YfkB 6e-88 77.0 152/153  
:HMM:PFM   37->190 PF04055 * Radical_SAM 3.2e-17 28.8 146/166  
:BLT:SWISS 1->373 YFKA_BACSU 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB12625.2 GT:GENE yfkA GT:PRODUCT putative Fe-S oxidoreductase, radical SAM superfamily GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(868007..869128) GB:FROM 868007 GB:TO 869128 GB:DIRECTION - GB:GENE yfkA GB:PRODUCT putative Fe-S oxidoreductase, radical SAM superfamily GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme GB:PROTEIN_ID CAB12625.2 GB:DB_XREF InterPro:IPR014866 SubtiList:BG12918 UniProtKB/TrEMBL:O34400 GB:GENE:GENE yfkA LENGTH 373 SQ:AASEQ MTQNTKLRPITPEFDPWEAYMDVDQYGDMQLTNVEFTTTTLCNMRCEHCAVGYTLQPKDPNALPIDLLLKRLEEIPRLRSISITGGEPMLSLKSVKEYVVPLLKYAHERGVRTQINSNLTLDIERYEWIIPYLDVLHISHNWGTVEDFAEIGFAMMDRKPTFEQRARYFEKMIENSRTLVDAGVMVSAETMLNKRTLPHIEHIHRQITEDMKCQRHEVHPMYPSDFASALESLSLKEMRQAIHRLLDIRDENTWMLFGTLPFYACSPDEDDQKLLRRLRAAKNVTVRNDPDGRSRLNVNIFDGNIIVTDFGDTPPLGNIQTDSLPSAYEKWRETKLAKELSCHCPNVRCLGPNVLVKNSYYQDTDFTKRQARS GT:EXON 1|1-373:0| SW:ID YFKA_BACSU SW:DE RecName: Full=Putative protein yfkA; SW:GN Name=yfkA; Synonyms=ykfB; OrderedLocusNames=BSU07955;ORFNames=BSU07950, BSU07960; SW:KW 4Fe-4S; Complete proteome; Iron; Iron-sulfur; Metal-binding;S-adenosyl-L-methionine. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->373|YFKA_BACSU|0.0|100.0|373/373| GO:SWS:NREP 3 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| RP:PDB:NREP 1 RP:PDB:REP 42->278|3chvA|5e-14|7.8|231/270| RP:PFM:NREP 1 RP:PFM:REP 221->371|PF08756|7e-70|77.5|151/153|YfkB| HM:PFM:NREP 2 HM:PFM:REP 221->372|PF08756|6e-88|77.0|152/153|YfkB| HM:PFM:REP 37->190|PF04055|3.2e-17|28.8|146/166|Radical_SAM| RP:SCP:NREP 1 RP:SCP:REP 24->248|1tv7A|7e-09|19.2|208/327|c.1.28.3| HM:SCP:REP 30->330|1tv8A_|3.1e-26|22.8|276/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 57 OP:NHOMOORG 57 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------111111111111111111111111111111111------1111111111111111111111--------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 327 STR:RPRED 87.7 SQ:SECSTR ##EcccEccTTccccTTcTTTccccTTEEcccccEEEEEEEccEEEEcccccccTTTcTTccccHHHHHHHHHHHHTccEEEEcEEcTTccEEccHHHHHHHHHHHHHHTTEEEEcccTTTccGGGGGTGGGcccEEEccccEEccccEcEEcccHHHHHHHHEEEEccHHHHHHHHHHHTTccccccEEEEEccTTccccHHHHHHHHHHHHEcTTcEEEETTcEEcTTHHHHHHHHHHHTTcEEEcTTTccccccccccccHHHHHHHHHHHHHHTHHHHHTTTccEEccccccTTT####GGGcccccccTTTTccTTcHHHHHHHHHHH######################################## DISOP:02AL 372-374| PSIPRED cccccccccccccccccHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEcccHHccHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHcccEEEEEEcccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHHHHcccEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEccccEEEccccHHHHHHHHHHHHccccccccccccccEEEEEcccccEEEccccccccccccccccHHHHHHHHHccHHHHHHccccccccccccccEEEEHHcccccccHHHccc //