[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : ygaK
DDBJ      :ygaK         putative FAD-dependent oxido-reductase
Swiss-Prot:YGAK_BACSU   RecName: Full=Uncharacterized FAD-linked oxidoreductase ygaK;         EC=1.-.-.-;

Homologs  Archaea  1/68 : Bacteria  140/915 : Eukaryota  76/199 : Viruses  0/175   --->[See Alignment]
a.102.1d.145.1
:451 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->444 2ipiA PDBj 1e-26 29.4 %
:RPS:PDB   9->445 3e0tA PDBj 1e-55 19.0 %
:RPS:SCOP  26->218 1mbbA1  d.145.1.2 * 2e-29 10.2 %
:RPS:SCOP  286->437 1h12A  a.102.1.2 * 4e-16 6.1 %
:HMM:SCOP  6->205 1e8gA2 d.145.1.1 * 3.4e-47 37.6 %
:RPS:PFM   34->120 PF01565 * FAD_binding_4 2e-10 36.8 %
:RPS:PFM   400->442 PF08031 * BBE 1e-11 55.8 %
:HMM:PFM   33->162 PF01565 * FAD_binding_4 1.4e-29 27.9 129/138  
:HMM:PFM   400->443 PF08031 * BBE 2.8e-23 59.1 44/47  
:BLT:SWISS 1->451 YGAK_BACSU 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB12708.2 GT:GENE ygaK GT:PRODUCT putative FAD-dependent oxido-reductase GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(957705..959060) GB:FROM 957705 GB:TO 959060 GB:DIRECTION - GB:GENE ygaK GB:PRODUCT putative FAD-dependent oxido-reductase GB:FUNCTION 16.11: Scavenge (Catabolism) GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId: 8972604; Product type pe : putative enzyme GB:PROTEIN_ID CAB12708.2 GB:DB_XREF GOA:Q796Y5 InterPro:IPR006094 SubtiList:BG12231 UniProtKB/Swiss-Prot:Q796Y5 GB:GENE:GENE ygaK LENGTH 451 SQ:AASEQ MEKTKLTGRIVTRDDPDYNEARTNINLSLERYPDIIVFCQNKQDALNALKWARENRVPFRIRGGRHSYENFSLLNNGLVIDLSEMKKITVNQDKKLAYIEAGAELGEVYRTLWQYGLTLPAGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMIVADEKEGADLITVSCSNHPDLFWASQGGGGGNFGIVTSMTFKAVPISQVSIFSITWGWDDFEEVYNTWQNWAPYTDDRLTSSIEFWPKEVNRIEALGQFVGPKTELKKLLKPLLKAGSPTSGMVKTTPFIEAVTFFNSPGGNQPQKMKRSGSFIEKPLSERAISTIKHFLEHAPNQNASVWQQALGGAAGRVAPDQTAFYYRDAIIAQEYLTNWTSPGEKRQNVRWIEGLRTSLSKETMGDYVNWPDIEIRNWPRTYYGENVERLRRVKTTYDPENVFRFEQSIPPLRRSLFF GT:EXON 1|1-451:0| SW:ID YGAK_BACSU SW:DE RecName: Full=Uncharacterized FAD-linked oxidoreductase ygaK; EC=1.-.-.-; SW:GN Name=ygaK; OrderedLocusNames=BSU08800; SW:KW Complete proteome; FAD; Flavoprotein; Oxidoreductase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->451|YGAK_BACSU|0.0|100.0|451/451| GO:SWS:NREP 2 GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| SEG 128->148|gltgltlgggiglltraaglt| SEG 261->273|ktelkkllkpllk| BL:PDB:NREP 1 BL:PDB:REP 11->444|2ipiA|1e-26|29.4|429/492| RP:PDB:NREP 1 RP:PDB:REP 9->445|3e0tA|1e-55|19.0|432/475| RP:PFM:NREP 2 RP:PFM:REP 34->120|PF01565|2e-10|36.8|87/139|FAD_binding_4| RP:PFM:REP 400->442|PF08031|1e-11|55.8|43/45|BBE| HM:PFM:NREP 2 HM:PFM:REP 33->162|PF01565|1.4e-29|27.9|129/138|FAD_binding_4| HM:PFM:REP 400->443|PF08031|2.8e-23|59.1|44/47|BBE| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08031|IPR012951| GO:PFM GO:0050660|"GO:FAD binding"|PF08031|IPR012951| RP:SCP:NREP 2 RP:SCP:REP 26->218|1mbbA1|2e-29|10.2|187/198|d.145.1.2| RP:SCP:REP 286->437|1h12A|4e-16|6.1|147/404|a.102.1.2| HM:SCP:REP 6->205|1e8gA2|3.4e-47|37.6|194/0|d.145.1.1|1/1|FAD-binding domain| OP:NHOMO 685 OP:NHOMOORG 217 OP:PATTERN ----------------------------1--------------------------------------- --2-2---------11133-3---313333312---2123-222-21-1---211-----222---32321-----------1--------------------1---1-------------------------------------1---1-------------------------------------------2-----12-----22------2--3---2----------2------------------------11---------------1----------------------------------------------------312122321-------111---------------------------------------------------------------------1-121--1---11111111--------------1------------------------------------------------3--------------1111--11111111--11222--111--1---131---------------------1------------------------1---1-1---------------------------------1-1--2---1111---111111--1-1-------------------------------------------------------------------------------------22222222122--------------------------------------------------1--------1---------------1------1---------------------------------------------------------------------------- ----57--------113F9D5A5CDDD21--117863333132232747BDAEI87A34566---------------------------5363681----131-1--223-----------------------------------------------------11------------------2-144yDN---11121 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 451 STR:RPRED 100.0 SQ:SECSTR ccccccccEEccTTcHHHHHHTccccGGGcccccEEEEcccHHHHHHHHHHHHHHTccEEEEcccccTTcTTTccccEEEEcTTcccEEEcTTccEEEETTccHHHHHHHHHHTTcEEccccccTTccHHHHHHHccccTTHHHHccGGGGEEEEEEEcTTccTTccEEEEETTccHHHHHHHTTTccccccEEEEEEEccEEcccEEEEEEcccHHHHHHHHHHHHHHHHHTccTTcccEEEEETTEEEEEEEEcccHHHHHHHHHHHHHHTTccEEEEEEEEEcHHHHHTTccTTccccccEEEccccHHHHHHHHHHHHHcccccTTEEEEEEEEEcccTTcTGGGccTTTcccccTTccEEEEEEEEETTTTTHHHHHHHHHHHHTTccGGGccccGGGccTTccHHHHHHHGGGHHHHHHHHHHHcTTcTTccTTcccccccEEEE DISOP:02AL 451-452| PSIPRED cccccccccEEEcccccHHHHHHccccccccccEEEEEEccHHHHHHHHHHHHHccccEEEEccccccccccccccEEEEEccccccEEEEccccEEEEEccccHHHHHHHHHHcccEEEccccccccHHHHHccccccccccccccHHHEEEEEEEEEcccccccEEEEccccccHHHHHHHccccccccEEEEEEEEEEEEcccEEEEEEEEcHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccEEEEEEEEcccHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccHHHHcccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccHHccccEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHcHHHHHHHHHHHHHHccccccccccccccHHHcccc //