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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yhdH
DDBJ      :yhdH         putative sodium-dependent transporter
Swiss-Prot:YHDH_BACSU   RecName: Full=Uncharacterized sodium-dependent transporter yhdH;

Homologs  Archaea  28/68 : Bacteria  313/915 : Eukaryota  24/199 : Viruses  0/175   --->[See Alignment]
f.54.1
:451 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->270 3gwwA PDBj 5e-19 30.3 %
:RPS:PDB   165->342 2a65A PDBj 1e-17 37.5 %
:RPS:SCOP  8->443 2a65A1  f.54.1.1 * 2e-48 22.2 %
:RPS:PFM   156->443 PF00209 * SNF 1e-32 38.5 %
:HMM:PFM   8->124 PF00209 * SNF 8.7e-26 31.3 115/522  
:HMM:PFM   149->444 PF00209 * SNF 1.3e-29 24.6 284/522  
:BLT:SWISS 1->451 YHDH_BACSU 0.0 100.0 %
:PROS 30->44|PS00610|NA_NEUROTRAN_SYMP_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB12786.1 GT:GENE yhdH GT:PRODUCT putative sodium-dependent transporter GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 1024865..1026220 GB:FROM 1024865 GB:TO 1026220 GB:DIRECTION + GB:GENE yhdH GB:PRODUCT putative sodium-dependent transporter GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId: 15849754, 16850406; Product type pt: putative transporter GB:PROTEIN_ID CAB12786.1 GB:DB_XREF GOA:O07577 InterPro:IPR000175 SubtiList:BG13014 UniProtKB/Swiss-Prot:O07577 GB:GENE:GENE yhdH LENGTH 451 SQ:AASEQ MSEQKPVQWASKIGFVMAAAGSAIGLGAIWKFPYVAGTNGGGAFFLIFVLFTILLGYPLLVGEFIFGRRNQTNAIDAYKKEAPRSAWFLTGWIGVAACFLVLSFYSVIGGWILLYIVKTASGSLSGLSQAQYGALFASIIQNPVQTLAAQLVFMALTVLVVARGVQKGIERVSAVMMPILFLLFILLVLRSLTLNGAMEGVKFLLVPHFGDLTPESILFALGQAFFTLTLGVSVMVTYSSYLPKTQNIPRSAASIVLMNIIVTLLAGLAIFPAVFSFGFQPNEGPTLLFTVLPAVFEQLPFGTLFFIGFLVAFLFAALTSAFSMVEIIVATIGKGDEKKRKKLSWTSGLLIFLVGIPCCLSYGVLSDVHLFGKTFFDIADFTVSNVLMPSGALLISLFIPLKISKSELLAEMRNGSNAGKAFFYTWFYLLRFIVPLAIIIVFLNLIGILSF GT:EXON 1|1-451:0| SW:ID YHDH_BACSU SW:DE RecName: Full=Uncharacterized sodium-dependent transporter yhdH; SW:GN Name=yhdH; OrderedLocusNames=BSU09470; SW:KW Cell membrane; Complete proteome; Membrane; Symport; Transmembrane;Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->451|YHDH_BACSU|0.0|100.0|451/451| GO:SWS:NREP 5 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0015293|"GO:symporter activity"|Symport| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 30->44|PS00610|NA_NEUROTRAN_SYMP_1|PDOC00533| TM:NTM 12 TM:REGION 9->31| TM:REGION 43->65| TM:REGION 91->113| TM:REGION 145->167| TM:REGION 172->194| TM:REGION 209->231| TM:REGION 254->276| TM:REGION 286->308| TM:REGION 312->333| TM:REGION 346->368| TM:REGION 379->401| TM:REGION 426->448| SEG 18->29|aaagsaiglgai| SEG 44->55|fflifvlftill| SEG 180->194|lfllfillvlrsltl| SEG 304->322|lffigflvaflfaaltsaf| BL:PDB:NREP 1 BL:PDB:REP 9->270|3gwwA|5e-19|30.3|261/501| RP:PDB:NREP 1 RP:PDB:REP 165->342|2a65A|1e-17|37.5|176/509| RP:PFM:NREP 1 RP:PFM:REP 156->443|PF00209|1e-32|38.5|275/352|SNF| HM:PFM:NREP 2 HM:PFM:REP 8->124|PF00209|8.7e-26|31.3|115/522|SNF| HM:PFM:REP 149->444|PF00209|1.3e-29|24.6|284/522|SNF| GO:PFM:NREP 4 GO:PFM GO:0005328|"GO:neurotransmitter:sodium symporter activity"|PF00209|IPR000175| GO:PFM GO:0005887|"GO:integral to plasma membrane"|PF00209|IPR000175| GO:PFM GO:0006836|"GO:neurotransmitter transport"|PF00209|IPR000175| GO:PFM GO:0016020|"GO:membrane"|PF00209|IPR000175| RP:SCP:NREP 1 RP:SCP:REP 8->443|2a65A1|2e-48|22.2|423/507|f.54.1.1| OP:NHOMO 629 OP:NHOMOORG 365 OP:PATTERN --1-11-----------------12332-21122--111111----1---2---1211113------- -----111111121--------------------------------111------11------1-1-------------435-1-1--1111-1--------------3-1111111111111111----11-------------------------111111---------11111111111---------124444444444444443333-24441--22111111111121111111111111-11111------------------------------------111111--11-------------------------32--111111-4142---411-15-21152-----3--221-11--12--1----1----------------------------------------1---------------111------------------------1-------------------------------1-1-------------------------------------------11---1---------333322222------111211-2--211111-11---21--1------5524333334232222222-1-1---33123134231-1111--2----2122-23----111--------------------------------------------------1-----------------------------------------112111----111332222121222222221111111111-------11-3----2111---------133333333333333-----------------5111111--------11--------------------------1--11-------- --------------------------------------------------------------------------------------------------------------42-1-11-----------------1---11--12----11--111-1--12-142--6--2--1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 335 STR:RPRED 74.3 SQ:SECSTR ####cccccccHHHHHHHHHHHHccHHHHTHHHHHHHTTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHH#HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHTccccccccccHHHHHHHHHHHHHHHTTcTTTTHHHHHHHHHHHHHHHHHHHHHHHTTcEEHHHHHHHHHcccTTcTTHHHHHHHHHHHHHHHTTTccHHHHHHTTccTTcccHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHcHHcccHHHHTHHHHHHTTcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH##HHTccccH############################################################################################################# DISOP:02AL 1-6| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHcccccccccccccccHHHHHHHHHHHHHHHccccHHHHcHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccc //