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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : ykuT
DDBJ      :ykuT         putative small-conductance mechanosensitive channel
Swiss-Prot:YKUT_BACSU   RecName: Full=Uncharacterized mscS family protein ykuT;

Homologs  Archaea  23/68 : Bacteria  453/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.38.1d.58.43f.34.1
:267 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   114->261 2vv5A PDBj 5e-07 29.1 %
:RPS:SCOP  110->174 2oauA1  b.38.1.3 * 2e-16 27.7 %
:RPS:SCOP  176->261 2oauA2  d.58.43.1 * 9e-11 24.1 %
:HMM:SCOP  19->109 2oauA3 f.34.1.1 * 1.4e-13 29.1 %
:HMM:SCOP  110->174 2oauA1 b.38.1.3 * 6.7e-16 41.5 %
:HMM:SCOP  174->261 2oauA2 d.58.43.1 * 3.7e-10 26.2 %
:RPS:PFM   109->261 PF00924 * MS_channel 9e-19 36.4 %
:HMM:PFM   68->260 PF00924 * MS_channel 4.9e-54 32.8 192/207  
:HMM:PFM   18->87 PF04276 * DUF443 0.00014 22.4 67/199  
:BLT:SWISS 1->267 YKUT_BACSU e-139 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB13294.2 GT:GENE ykuT GT:PRODUCT putative small-conductance mechanosensitive channel GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(1491221..1492024) GB:FROM 1491221 GB:TO 1492024 GB:DIRECTION - GB:GENE ykuT GB:PRODUCT putative small-conductance mechanosensitive channel GB:FUNCTION 16.3: Control GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId: 12626684; Product type pt : putative transporter GB:PROTEIN_ID CAB13294.2 GB:DB_XREF GOA:O34897 InterPro:IPR006685 SubtiList:BG13304 UniProtKB/Swiss-Prot:O34897 GB:GENE:GENE ykuT LENGTH 267 SQ:AASEQ MDFIKQYDWAGLITNAGVLLIKLAIMILLYFIVRSLGMKIIKHLFAKFEEQNSLSIGRAHTLRSLTLNIFAYTLIFIFFVMVLDLFHYDPSALLAGAGIVGLAVGFGAQGLVSDIVTGFFILLEKQLDVGDYITVSTFDGIVEQVGLRTTQIRSFDGTLHYIPNRNITNVSNHSRGTMQALVDIKVPAERNIDEMIHILQQVCDETAAALPQIKEGPNVIGIQELGTSEIVIRVIAKTENMEQWRVERVLRKEIKNAFDRAFPKETE GT:EXON 1|1-267:0| SW:ID YKUT_BACSU SW:DE RecName: Full=Uncharacterized mscS family protein ykuT; SW:GN Name=ykuT; OrderedLocusNames=BSU14210; SW:KW Cell membrane; Complete proteome; Membrane; Transmembrane. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->267|YKUT_BACSU|e-139|100.0|267/267| GO:SWS:NREP 3 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| TM:NTM 3 TM:REGION 18->40| TM:REGION 64->86| TM:REGION 100->122| SEG 92->108|allagagivglavgfga| BL:PDB:NREP 1 BL:PDB:REP 114->261|2vv5A|5e-07|29.1|141/256| RP:PFM:NREP 1 RP:PFM:REP 109->261|PF00924|9e-19|36.4|151/203|MS_channel| HM:PFM:NREP 2 HM:PFM:REP 68->260|PF00924|4.9e-54|32.8|192/207|MS_channel| HM:PFM:REP 18->87|PF04276|0.00014|22.4|67/199|DUF443| GO:PFM:NREP 2 GO:PFM GO:0016020|"GO:membrane"|PF00924|IPR006685| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00924|IPR006685| RP:SCP:NREP 2 RP:SCP:REP 110->174|2oauA1|2e-16|27.7|65/67|b.38.1.3| RP:SCP:REP 176->261|2oauA2|9e-11|24.1|83/101|d.58.43.1| HM:SCP:REP 19->109|2oauA3|1.4e-13|29.1|86/0|f.34.1.1|1/1|Mechanosensitive channel protein MscS (YggB), transmembrane region| HM:SCP:REP 110->174|2oauA1|6.7e-16|41.5|65/0|b.38.1.3|1/1|Sm-like ribonucleoproteins| HM:SCP:REP 174->261|2oauA2|3.7e-10|26.2|84/0|d.58.43.1|1/1|Mechanosensitive channel protein MscS (YggB), C-terminal domain| OP:NHOMO 574 OP:NHOMOORG 476 OP:PATTERN ----22------------------1-----11----1-11111--11--1111-111-111------- 21--11--11111121111-12--1211111132221222-2121-1111111111-1--1111111121------------1111-----------------111--1--------------------------1-----1111144312211111-1----24222323-1-----1----11111---11222222222122222211--222221111111111111111111111111111111222111111111111111111111--11111111111111111111111111111111111111111111111111-1111111111111111-111-1111-1111--111-11111111-----------------1--------------------1-11-1111122--211132-433211-1-12-111112131111111112212111----------------------------------1----11111111----1122------1122122--111--------1---1-11-2-----------1----11-211--1------------2-----111--------------------------------11--11----------------------11211------11---111111111111-1111111111111111111111-----111111111111111111--1-11-------------------1--11111-1-2-----------------------111--11111222-1211-111-------------1---------------------------------------1----1-----------------------------1-------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 141 STR:RPRED 52.8 SQ:SECSTR #################################################################################################################HHHHHHHHHTTccccTTcEEEccccEEEEEEEcccEEEEEcTTccEEEEEHHHHHccEEcccccEEEEEEEEEcTTccHHHHHHHHHHHHHHcTTcc###TTccEEEEEEEEccccEEEEEEEETTTHHHHHH####HHHHHHHHHHH###### PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccEEEEEEEEEEEEEEEEEccccEEEEEcccEEEEEEEEcccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccEEEEEEEEEEccHHHHHHHHHHHHHHHHHHccccccccc //