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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yosQ
DDBJ      :yosQ         SPbeta phage endodeoxyribonuclease (homing endonuclease, responsible for intron mobility)
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  0/199 : Viruses  2/175   --->[See Alignment]
d.4.1
:173 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->106 1u3eM PDBj 2e-11 38.8 %
:RPS:PDB   14->103 1a73A PDBj 5e-16 8.9 %
:RPS:SCOP  8->103 1u3eM1  d.4.1.3 * 5e-20 40.0 %
:HMM:SCOP  1->104 1u3eM1 d.4.1.3 * 2.5e-29 42.7 %
:HMM:PFM   54->96 PF01844 * HNH 1.1e-10 16.3 43/52  
:HMM:PFM   140->169 PF09432 * THP2 0.00035 30.0 30/132  
:BLT:SWISS 8->106 HMUI_BPSP1 5e-11 38.8 %
:BLT:SWISS 123->169 GPMI_BACHD 4e-04 45.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB13895.1 GT:GENE yosQ GT:PRODUCT SPbeta phage endodeoxyribonuclease (homing endonuclease, responsible for intron mobility) GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(2160565..2161086) GB:FROM 2160565 GB:TO 2161086 GB:DIRECTION - GB:GENE yosQ GB:PRODUCT SPbeta phage endodeoxyribonuclease (homing endonuclease, responsible for intron mobility) GB:FUNCTION 16.5: Explore GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 11470879, 16621400, 17395719, 9465078; Product type h: extrachromosomal origin GB:PROTEIN_ID CAB13895.1 GB:DB_XREF GOA:O34479 InterPro:IPR003615 SubtiList:BG13726 UniProtKB/TrEMBL:O34479 GB:GENE:GENE yosQ LENGTH 173 SQ:AASEQ MIRKEVEEAPWWITETGVIISKKLKKPRKTFITPHGYEMIGYTHPKKGTQNYLVHRLVAKYFIYDIPKGMFVNHIDGNKLNNHVRNLEIVTPKENTLHAMKIGLMSGQPGESNSMSKLTNMEATNLIYDLIAGMNNVEAGEKYSLHPRYVSLIRHKRRWKTLWDRIERSTTIA GT:EXON 1|1-173:0| BL:SWS:NREP 2 BL:SWS:REP 8->106|HMUI_BPSP1|5e-11|38.8|98/174| BL:SWS:REP 123->169|GPMI_BACHD|4e-04|45.2|42/510| BL:PDB:NREP 1 BL:PDB:REP 8->106|1u3eM|2e-11|38.8|98/174| RP:PDB:NREP 1 RP:PDB:REP 14->103|1a73A|5e-16|8.9|90/162| HM:PFM:NREP 2 HM:PFM:REP 54->96|PF01844|1.1e-10|16.3|43/52|HNH| HM:PFM:REP 140->169|PF09432|0.00035|30.0|30/132|THP2| RP:SCP:NREP 1 RP:SCP:REP 8->103|1u3eM1|5e-20|40.0|95/105|d.4.1.3| HM:SCP:REP 1->104|1u3eM1|2.5e-29|42.7|103/105|d.4.1.3|1/1|His-Me finger endonucleases| OP:NHOMO 8 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------1------------1--------------------------------------------------------------------------------------------------------1-----1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------1----------------------------------------------------------------------------------------------------------------------1------------------------------------------------ STR:NPRED 99 STR:RPRED 57.2 SQ:SECSTR #######TTTEEEEEEEEEcccccccccTTEEEEETTEEEEEEEETTEEEEEETTTGGGTTcccETTEEEEEEETTccTTcccGGGEEEEEHHHHHHGGGcccccc################################################################### DISOP:02AL 1-2, 171-173| PSIPRED ccEEEcccccEEEcccccEEEEEccEEEcccccccccEEEEEEEcccEEEEEHHHHHHHHHHccccccccEEEccccccccccHHHHHHccHHHHHHHHHHHccccccccccccEEcccccHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHHHHHHHHHHHHHcccc //