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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yrbD
DDBJ      :yrbD         sodium/proton-dependent alanine transporter
Swiss-Prot:YRBD_BACSU   RecName: Full=Putative sodium/proton-dependent alanine carrier protein yrbD;

Homologs  Archaea  15/68 : Bacteria  488/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:484 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   48->454 PF01235 * Na_Ala_symp 3e-85 49.0 %
:HMM:PFM   42->462 PF01235 * Na_Ala_symp 1.9e-160 53.2 406/416  
:BLT:SWISS 1->484 YRBD_BACSU 0.0 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB14741.2 GT:GENE yrbD GT:PRODUCT sodium/proton-dependent alanine transporter GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 2841611..2843065 GB:FROM 2841611 GB:TO 2843065 GB:DIRECTION + GB:GENE yrbD GB:PRODUCT sodium/proton-dependent alanine transporter GB:FUNCTION 16.1: Circulate GB:NOTE Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; PubMedId: 1400476, 15849754, 16850406; Product type t : transporter GB:PROTEIN_ID CAB14741.2 GB:DB_XREF GOA:O32060 InterPro:IPR001463 SubtiList:BG13784 UniProtKB/Swiss-Prot:O32060 GB:GENE:GENE yrbD LENGTH 484 SQ:AASEQ MADFVASLNAVLWSTPVIYILLGIGFAFSIMTRFLQVRHLKEMIVQMFKGKSSEAGVSSFQALSIALSGRVGTGNIAGVATAIAFGGPGAVFWMWAIAFIGAASAFVESTLAQIYKVKQDGQYRGGPAYYIEKGLGIKWFAVLFAAAALIAMAFLMPGVQSNSIAAGIQNAFGISPFVTGCGLVLLLGFIIFGGVKRIANAAQMIVPFMAIGYILLSLIIIVMNVSELPAVISLIFKSAFALDSAFGGLIGMAISWGVKRGIYSNEAGQGTGPHPAAAAEVSHPVKQGLVQAFSVYIDTLFVCSATAFMILFTGMYNTQAADGSFIVHQLKGVEAGPGFTQAAIDSVLPGFGAGFVAIALFFFAFTTIMAYYYIAETNIAYLARGRESKWAMLGLKLIILAATFYGTVKTASLAWALGDAGLGIMVWLNVIAIVLLAKPALLALKDYERQKKQGLDPIFDPKALGIKNADFWEKEYTHESERVS GT:EXON 1|1-484:0| SW:ID YRBD_BACSU SW:DE RecName: Full=Putative sodium/proton-dependent alanine carrier protein yrbD; SW:GN Name=yrbD; OrderedLocusNames=BSU27810; SW:KW Amino-acid transport; Cell membrane; Complete proteome; Ion transport;Membrane; Sodium; Sodium transport; Symport; Transmembrane; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->484|YRBD_BACSU|0.0|100.0|484/484| GO:SWS:NREP 8 GO:SWS GO:0006865|"GO:amino acid transport"|Amino-acid transport| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0006811|"GO:ion transport"|Ion transport| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0006814|"GO:sodium ion transport"|Sodium transport| GO:SWS GO:0015293|"GO:symporter activity"|Symport| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 10 TM:REGION 8->30| TM:REGION 92->114| TM:REGION 136->158| TM:REGION 170->192| TM:REGION 202->224| TM:REGION 234->256| TM:REGION 291->313| TM:REGION 349->371| TM:REGION 391->413| TM:REGION 418->440| SEG 140->155|favlfaaaaliamafl| SEG 182->195|glvlllgfiifggv| SEG 350->365|gfgagfvaialfffaf| SEG 430->445|viaivllakpallalk| RP:PFM:NREP 1 RP:PFM:REP 48->454|PF01235|3e-85|49.0|392/408|Na_Ala_symp| HM:PFM:NREP 1 HM:PFM:REP 42->462|PF01235|1.9e-160|53.2|406/416|Na_Ala_symp| GO:PFM:NREP 3 GO:PFM GO:0005283|"GO:sodium:amino acid symporter activity"|PF01235|IPR001463| GO:PFM GO:0006814|"GO:sodium ion transport"|PF01235|IPR001463| GO:PFM GO:0016020|"GO:membrane"|PF01235|IPR001463| OP:NHOMO 953 OP:NHOMOORG 503 OP:PATTERN --1-----------------------------------11111--1---1111-1111---------- -----221112222-------1---2------11111-11------341----1-32--------21-111--------344------1111-1---------42-1-1-12222222222222411-1-1--111-----------11-11-----111111-------2-11----1--1---111--1-226676766736777773556346761113336------1-22222222222222221112--------------------------1111111-111111111111111111111111111111111111-14--7767777172-311322214-41-231-11-3---31-11---41--1----------------------1111111111----------1-1-----------32-1211112----111----------------11-2222211---------------3232-1-1-----12111111-111111--1111112-------------------------1--1313333333---1----1-52-2--211---------11--1-----12-1-1111-111111111111--1--333221212314333333333333334334--11-11------11--21-1111111111-1111111111111111111111--22221222122222222121-11----1----------------1----------132322211222222222211111-1-321-33331111211112111---------14446333333344412-1-11---------13111111--------12-------------------------------------11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 484-485| PSIPRED cHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccHHHHHcccc //