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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yrrC
DDBJ      :yrrC         putative exonuclease with DNA/RNA helicase motif
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  535/915 : Eukaryota  24/199 : Viruses  1/175   --->[See Alignment]
a.60.2c.37.1
:798 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   190->723 3gplA PDBj 1e-48 33.6 %
:RPS:PDB   35->188 1bvsA PDBj 1e-13 14.3 %
:RPS:PDB   200->761 3e1sA PDBj 8e-48 26.7 %
:RPS:SCOP  109->176 1c7yA2  a.60.2.1 * 9e-10 17.6 %
:RPS:SCOP  197->535 1w36D1  c.37.1.19 * 2e-30 22.3 %
:RPS:SCOP  546->756 1w36D2  c.37.1.19 * 1e-20 22.2 %
:HMM:SCOP  196->517 1w36D1 c.37.1.19 * 2.7e-47 30.3 %
:HMM:SCOP  468->755 1w36D2 c.37.1.19 * 4.8e-60 38.3 %
:RPS:PFM   405->482 PF05127 * DUF699 6e-06 42.1 %
:RPS:PFM   669->728 PF01443 * Viral_helicase1 9e-09 43.3 %
:HMM:PFM   364->503 PF01443 * Viral_helicase1 2.3e-05 24.8 109/226  
:HMM:PFM   665->729 PF01443 * Viral_helicase1 4.7e-06 27.4 62/226  
:HMM:PFM   344->381 PF00437 * GSPII_E 5.8e-05 26.3 38/282  
:HMM:PFM   62->134 PF12010 * DUF3502 0.00023 19.4 72/140  
:BLT:SWISS 95->217 DNLJ_BACSK 4e-05 28.1 %
:BLT:SWISS 405->735 EX5A_ECOLI 2e-25 33.5 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB14689.1 GT:GENE yrrC GT:PRODUCT putative exonuclease with DNA/RNA helicase motif GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(2806286..2808682) GB:FROM 2806286 GB:TO 2808682 GB:DIRECTION - GB:GENE yrrC GB:PRODUCT putative exonuclease with DNA/RNA helicase motif GB:FUNCTION 16.9: Replicate 16.6: Maintain GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId: 11557815, 3537961; Product type pe: putative enzyme GB:PROTEIN_ID CAB14689.1 GB:DB_XREF GOA:O34481 InterPro:IPR006345 SubtiList:BG13789 UniProtKB/TrEMBL:O34481 GB:GENE:GENE yrrC LENGTH 798 SQ:AASEQ MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGLQFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQGLEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETTCLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQTEYENQFPESEFLLALGELEERMDVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKDEAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQIIIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEVVEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ GT:EXON 1|1-798:0| BL:SWS:NREP 2 BL:SWS:REP 95->217|DNLJ_BACSK|4e-05|28.1|114/671| BL:SWS:REP 405->735|EX5A_ECOLI|2e-25|33.5|322/608| COIL:NAA 28 COIL:NSEG 1 COIL:REGION 746->773| SEG 358->375|lsspmllltggpgtgktt| BL:PDB:NREP 1 BL:PDB:REP 190->723|3gplA|1e-48|33.6|476/516| RP:PDB:NREP 2 RP:PDB:REP 35->188|1bvsA|1e-13|14.3|154/183| RP:PDB:REP 200->761|3e1sA|8e-48|26.7|513/517| RP:PFM:NREP 2 RP:PFM:REP 405->482|PF05127|6e-06|42.1|76/130|DUF699| RP:PFM:REP 669->728|PF01443|9e-09|43.3|60/220|Viral_helicase1| HM:PFM:NREP 4 HM:PFM:REP 364->503|PF01443|2.3e-05|24.8|109/226|Viral_helicase1| HM:PFM:REP 665->729|PF01443|4.7e-06|27.4|62/226|Viral_helicase1| HM:PFM:REP 344->381|PF00437|5.8e-05|26.3|38/282|GSPII_E| HM:PFM:REP 62->134|PF12010|0.00023|19.4|72/140|DUF3502| GO:PFM:NREP 1 GO:PFM GO:0004386|"GO:helicase activity"|PF01443|IPR000606| RP:SCP:NREP 3 RP:SCP:REP 109->176|1c7yA2|9e-10|17.6|68/86|a.60.2.1| RP:SCP:REP 197->535|1w36D1|2e-30|22.3|319/348|c.37.1.19| RP:SCP:REP 546->756|1w36D2|1e-20|22.2|185/190|c.37.1.19| HM:SCP:REP 196->517|1w36D1|2.7e-47|30.3|304/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 468->755|1w36D2|4.8e-60|38.3|235/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 664 OP:NHOMOORG 561 OP:PATTERN ------------------------------------1------------------------------- ----2---------1------1--11-----11111-111-222----------------11--1-11112--------------------1-------------1---1222222222222222221221223-1111-----1-3-11-------11111--2-1112--111---1-11-111------1111111111111111111111111111111111111111-111111111111111112111111221111111112211111111111111111111111111111111111111111111211111111111211111111111111111111121112112-----1-11-1121---1------11--11-1--1-1--1-1------------2132313-----1--------------------------11111111221---------------12----------------------------------1----1111-------31-------------1--1-----2----111-------1-1---233112313111112122111-4-----1221-------------------1----1-11-12-211111222211121111111112---11---1----111-1111111111111-111111111111111111111111111111111111111111111111111--111111111111-11--------1-1111111111111111111-11111111111-1111111111111-1111----1----1112111111211111111111111111--1-111111111-11-1--1----1-211-1-----22--11--------------1- ------1-------------------------------------------------------------------------------------------------------3----1----1111---1-141----------11----1--------1------------3--1-1--191-111-------------- -------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 746 STR:RPRED 93.5 SQ:SECSTR ####EEEEEccccEEEEEEEEEEEcccHHHHHHTccEEEEEEccccEEEEETTEEEcccccHHHHTTcccccEEcccEEEEEETTEEEEEEcccHHHHHHHHHHHTcccccHHHHHHHHHHccHHHHHHHTTTTcHHHTcTTccHHHHHHHGGGcccccHHHHTTHHHHHHTccHHHHHHHHHHHHHcHHHHHHHccccGGGTcccccHHHHHTTcccEEHHHccHHHHHHHHHHHHHHHHHHTccccEEHHHHHHHHHHHHcccHHHHHHHHHHHHHTccEEEccccccccccccEEEccEEEccHHHHHHHHHHHHHHHHHHHccccccccccccccTTTTTTccHHHHHHHHHHTTccEEEEEccTTccHHHHHHHHHHHHHHT###########HHTTccEEEEEccHHHHHHHHHHHTccEEEHHHHTTEEETTEEcccccccccccEEEEccGGGccHHHHHHHHTTccTTcEEEEEEcTTcccccccccHHHHHHHHHHccEEEcccccHHHHTcHHHHHHHHHHTTcccccEEEcccTccTTEEEEEcccTTcHHHHHHHHHHTTcGGGcEEEEcccccTTcHHHHHHHHHHHHcHHHcccccEEccccEEcTTcEEEEccccTTTTccTTcEEEEEEEccccHHHHHHccEEEEETTEEEEEcGGGGTTEEEccEEEHHHHTTccEEEEEEEEcGGGGGGccHHHHHHHHHTEEEEEEEEEcHHHHHHHHHccccccccccHHHHHHHHHTT##################################### DISOP:02AL 1-10, 319-327, 757-783, 795-798| PSIPRED ccccHHHHcccccEEEEEEEEEEEEEEccccEEEEEEEEccccccccccEEEEEEEccccccccEEEEEEEEEEccccccEEEEEEEEEEccccHHHHHHHHcccccccccHHHHHHHHHHHcHHHHHHHHccHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHcHHEEHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccEEEcHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccEEEEccEEEEHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccccEEEHHHHHccccccccHHHHHcccccEEEEEccccccHHHHHHHHHHcccccEEEEEEcHHHccccccccHHHHHHHcccccEEEEHHHHHHccccHHHHHHHHHHHHcccHHHHHHcccccEEEcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHcccccccEEEEcccEEEEEEEcccccccccHHHHHHHHHccccccccccEEEEEccccEEEEEHHHccccccEEEEEEEHHccccccEEEEEEccccccccccccEEEEEEEEccEEEEEEcHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccccccccccEEccccccccHHHHHHcc //