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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : ysdC
DDBJ      :ysdC         putative endo-1,4-beta-glucanase
Swiss-Prot:YSDC_BACSU   RecName: Full=Putative aminopeptidase ysdC;         EC=3.4.11.-;

Homologs  Archaea  51/68 : Bacteria  292/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.49.3c.56.5
:361 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->361 1vheA PDBj e-180 100.0 %
:RPS:PDB   7->350 2cf4A PDBj 5e-36 31.8 %
:RPS:SCOP  3->68 1vheA2  c.56.5.4 * 8e-13 95.5 %
:RPS:SCOP  73->162 1vheA1  b.49.3.1 * 3e-31 95.6 %
:RPS:SCOP  146->360 1vheA2  c.56.5.4 * 2e-31 91.2 %
:HMM:SCOP  6->362 1yloA2 c.56.5.4 * 2.9e-73 38.9 %
:RPS:PFM   48->342 PF05343 * Peptidase_M42 1e-96 61.6 %
:HMM:PFM   48->342 PF05343 * Peptidase_M42 1e-120 54.1 292/292  
:BLT:SWISS 1->361 YSDC_BACSU 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB14842.1 GT:GENE ysdC GT:PRODUCT putative endo-1,4-beta-glucanase GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(2950221..2951306) GB:FROM 2950221 GB:TO 2951306 GB:DIRECTION - GB:GENE ysdC GB:PRODUCT putative endo-1,4-beta-glucanase GB:FUNCTION 16.11: Scavenge (Catabolism) GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme GB:PROTEIN_ID CAB14842.1 GB:DB_XREF GOA:P94521 InterPro:IPR008007 PDB:1VHE SubtiList:BG12317 UniProtKB/Swiss-Prot:P94521 GB:GENE:GENE ysdC LENGTH 361 SQ:AASEQ MAKLDETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGTDSGAIHLTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKLDRKTVDEITYQ GT:EXON 1|1-361:0| SW:ID YSDC_BACSU SW:DE RecName: Full=Putative aminopeptidase ysdC; EC=3.4.11.-; SW:GN Name=ysdC; OrderedLocusNames=BSU28820; SW:KW 3D-structure; Aminopeptidase; Complete proteome; Hydrolase;Metal-binding; Metalloprotease; Protease. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->361|YSDC_BACSU|0.0|100.0|361/361| GO:SWS:NREP 5 GO:SWS GO:0004177|"GO:aminopeptidase activity"|Aminopeptidase| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0008237|"GO:metallopeptidase activity"|Metalloprotease| GO:SWS GO:0008233|"GO:peptidase activity"|Protease| BL:PDB:NREP 1 BL:PDB:REP 19->361|1vheA|e-180|100.0|333/354| RP:PDB:NREP 1 RP:PDB:REP 7->350|2cf4A|5e-36|31.8|327/327| RP:PFM:NREP 1 RP:PFM:REP 48->342|PF05343|1e-96|61.6|292/292|Peptidase_M42| HM:PFM:NREP 1 HM:PFM:REP 48->342|PF05343|1e-120|54.1|292/292|Peptidase_M42| RP:SCP:NREP 3 RP:SCP:REP 3->68|1vheA2|8e-13|95.5|66/275|c.56.5.4| RP:SCP:REP 73->162|1vheA1|3e-31|95.6|90/90|b.49.3.1| RP:SCP:REP 146->360|1vheA2|2e-31|91.2|215/275|c.56.5.4| HM:SCP:REP 6->362|1yloA2|2.9e-73|38.9|265/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 641 OP:NHOMOORG 344 OP:PATTERN 111-11----------222222211111112111111111111111111111114343343---3--- --1------------22----1---1-----------------------------------------------------11-2--------1----2111-111112111-------------------------122211---14------1----------1---111-------------421--44142333333333333333342333333322225233333334-3333333333333333223331-1-21-111----11---11-11122221112112222222222211111111111112221112222-3432-------1--32334-1-1-31-4-1--33-----1--363----1-1--------------------------------1-1--1------------------11------11----------------------1-------------------------------------------------------------------------------------------------------1-----------------111111111-------1-------------------------------------------------------------21-------1------3221311122-2232221222222333332--------1111111111111111-2-12222-----------------------1111-------------------------------------1----1-----------------------------------------------1----------------21-1---2--12--111----121114434334333113 -------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 360 STR:RPRED 99.7 SQ:SECSTR #HHHHHcHHHHHHHHHccccTTccHHHHHHHHHTTTTcccEcEEcccccEEEccccccHcccccEEEEcccEEEEEEEEcTTccEEEEEEccccGGGTTTcEEEEEccccEEEEEcccccccccccccccccccTTccccccccccHHHHHTTccTTcEEEEccccEEccccccEEEcTTHHHHHHHHHHHHHHHccGGGccccccEEEEEcccTTTcHHHHHHTTTcccccEEEccEEEccccccTTccTTcccEEEEEcEEEEcccccccHHHHHHHHHHHHTTTcccEEEEcEccccGGGGTHHHTTcccEEEEEEEEEcTTTTTcEEEHHHHHHHHTTccTTTTTcHcccccccccH DISOP:02AL 1-2, 125-126, 128-131| PSIPRED cccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccEEEEEcccEEEEEEcccccccEEEEEEcccEEcEEEEEEccccEEEEEEEccccHHHHccccEEEEEccccEEEEEcccccEEEcHHHcccccccccEEEEEccccHHHHHHHccccccEEEEcccEEEEccccEEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccccccccccccEEEEEEEEcccccccccccccccEEccccEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHcccccEEEEEcccccccccccEEEcHHHHHHHHHHHHHHHHHccHHHHHHHccc //