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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : ytzG
DDBJ      :ytzG         putative 16S pseudouridylate synthase
Swiss-Prot:YTZF_BACSU   RecName: Full=Uncharacterized RNA pseudouridine synthase ytzF;         EC=5.4.99.-;AltName: Full=RNA-uridine isomerase;AltName: Full=RNA pseudouridylate synthase;

Homologs  Archaea  0/68 : Bacteria  840/915 : Eukaryota  29/199 : Viruses  0/175   --->[See Alignment]
d.265.1d.66.1
:239 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->221 1kskA PDBj 7e-30 39.6 %
:RPS:PDB   1->221 3dh3B PDBj 5e-30 30.2 %
:RPS:SCOP  1->57 1vioA2  d.66.1.5 * 2e-08 19.6 %
:RPS:SCOP  62->221 1kskA4  d.265.1.3 * 5e-36 44.5 %
:HMM:SCOP  1->60 1kskA3 d.66.1.5 * 2.6e-12 40.7 %
:HMM:SCOP  44->234 1przA_ d.265.1.3 * 2.9e-39 34.6 %
:RPS:PFM   63->191 PF00849 * PseudoU_synth_2 1e-08 40.3 %
:HMM:PFM   62->195 PF00849 * PseudoU_synth_2 9.5e-21 27.6 134/164  
:HMM:PFM   1->44 PF01479 * S4 3.5e-14 40.9 44/48  
:BLT:SWISS 83->239 YTZF_BACSU 4e-77 99.4 %
:PROS 100->114|PS01149|PSI_RSU
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB14982.2 GT:GENE ytzG GT:PRODUCT putative 16S pseudouridylate synthase GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(3072743..3073462) GB:FROM 3072743 GB:TO 3073462 GB:DIRECTION - GB:GENE ytzG GB:PRODUCT putative 16S pseudouridylate synthase GB:FUNCTION 16.6: Maintain 16.8: Protect 16.2: Construct biomass (Anabolism) GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme GB:PROTEIN_ID CAB14982.2 GB:DB_XREF GOA:O32069 InterPro:IPR002942 SubtiList:BG13941 UniProtKB/TrEMBL:O32069 GB:GENE:GENE ytzG LENGTH 239 SQ:AASEQ MRLDKLLANSGYGSRKEVKAVVKAGAVMIDGKPAKDVKEHVDPDTQEVTVYGEPVDYREFIYLMMNKPQGVLSATEDSRQQTVVDLLTPEEMRFEPFPAGRLDKDTEGFLLLTNDGQLAHRLLSPKKHVPKTYEVHLKSQISREDISDLETGVYIEGGYKTKPAKAEIKTNDSGNTVIYLTITEGKYHQVKQMAKAVGNEVVYLKRLSMGRVSLDPALAPGEYRELTEEELHLLNEPQA GT:EXON 1|1-239:0| SW:ID YTZF_BACSU SW:DE RecName: Full=Uncharacterized RNA pseudouridine synthase ytzF; EC=5.4.99.-;AltName: Full=RNA-uridine isomerase;AltName: Full=RNA pseudouridylate synthase; SW:GN Name=ytzF; OrderedLocusNames=BSU30030; SW:KW Complete proteome; Isomerase; RNA-binding. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 83->239|YTZF_BACSU|4e-77|99.4|157/157| GO:SWS:NREP 2 GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| PROS 100->114|PS01149|PSI_RSU|PDOC00885| SEG 16->27|kevkavvkagav| SEG 222->236|eyrelteeelhllne| BL:PDB:NREP 1 BL:PDB:REP 2->221|1kskA|7e-30|39.6|212/230| RP:PDB:NREP 1 RP:PDB:REP 1->221|3dh3B|5e-30|30.2|212/241| RP:PFM:NREP 1 RP:PFM:REP 63->191|PF00849|1e-08|40.3|124/149|PseudoU_synth_2| HM:PFM:NREP 2 HM:PFM:REP 62->195|PF00849|9.5e-21|27.6|134/164|PseudoU_synth_2| HM:PFM:REP 1->44|PF01479|3.5e-14|40.9|44/48|S4| GO:PFM:NREP 4 GO:PFM GO:0001522|"GO:pseudouridine synthesis"|PF00849|IPR006145| GO:PFM GO:0003723|"GO:RNA binding"|PF00849|IPR006145| GO:PFM GO:0009451|"GO:RNA modification"|PF00849|IPR006145| GO:PFM GO:0009982|"GO:pseudouridine synthase activity"|PF00849|IPR006145| RP:SCP:NREP 2 RP:SCP:REP 1->57|1vioA2|2e-08|19.6|56/58|d.66.1.5| RP:SCP:REP 62->221|1kskA4|5e-36|44.5|155/172|d.265.1.3| HM:SCP:REP 1->60|1kskA3|2.6e-12|40.7|59/0|d.66.1.5|1/1|Alpha-L RNA-binding motif| HM:SCP:REP 44->234|1przA_|2.9e-39|34.6|191/252|d.265.1.3|1/1|Pseudouridine synthase| OP:NHOMO 2000 OP:NHOMOORG 869 OP:PATTERN -------------------------------------------------------------------- 1221111111111111111-11111111111111111111111111111111111111--11111111111-1111111111121222111111-11--21333143412-1111111-1111111111111111111111111112212222222212212212222222121111121111-1-2222-222-4444444344444422222244422232332222223332222222222222222222-21222212222211222222213333333333322333333333333333333333333333333333323324222222242422223344232222221111121111222222-22211333311111121111111111111111111111-3322222212112111222222221133121111112221111111111111312------------1111--11----------12-2-222224334344444444434444444444344333333344443223143345444333433332224442111311111111111111112111111311121111-------1-------2111233442355624545666677755556-77577--2111211-11143333444444444444-4444444444444444444444333344444444444444443544434442-433343333444--2211111222224234333333333333213333333344333333333333-3333333111111111354464444444544554444444422221112221111111111112-311111-21111--1111---12---2212211111133 11--22--1---------------------------------------------------------------------------------------------------72-----------------------------------------------------2---------1-1-15B343-111-1-113342222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 221 STR:RPRED 92.5 SQ:SECSTR EEHHHHHHTTTcccHHHHHHHHHTTcEEETTEEccTTcEEcccccEEETTEEEccccGGccEEEEEEcTTcccccccccTTcHHHHHTccccccccEEccccccccEEEEEEEccTHHHHHHHcGGGcccEEEEEEEcccccHHHHHHHHTcccccccEcccccEEEEcEEEEcccEEEEEEccccTTHHHHHHHHTTccEEEEEEEEETTEEcTTTccTT################## PSIPRED ccHHHHHHHcccccHHHHHHHHHcccEEEccEEEccccEEEcccccEEEEccccccccccEEEEEEccccEEEcccccccccHHHHHHHccccccEEEEccccccccEEEEEEccHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHcccEEccccccccEEEEEEEccccEEEEEEEEEEcccHHHHHHHHHcccEEEEEEEEEEEEEEcccccccccEEEccHHHHHHHHHHcc //