[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yufM
DDBJ      :yufM         two-component response regulator [YufL]
Swiss-Prot:MALR_BACSU   RecName: Full=Transcriptional regulatory protein malR;AltName: Full=Malate response regulator;

Homologs  Archaea  10/68 : Bacteria  733/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
c.23.1
:235 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->118 1srrC PDBj 2e-14 32.7 %
:RPS:PDB   2->140 3cz5B PDBj 1e-24 19.0 %
:RPS:PDB   172->217 3bp8A PDBj 2e-04 19.6 %
:RPS:SCOP  2->115 1a0oA  c.23.1.1 * 6e-24 27.4 %
:HMM:SCOP  1->190 1s8nA_ c.23.1.1 * 8.8e-36 30.9 %
:RPS:PFM   4->115 PF00072 * Response_reg 1e-18 42.7 %
:HMM:PFM   4->115 PF00072 * Response_reg 5.4e-28 42.3 111/112  
:HMM:PFM   174->202 PF08279 * HTH_11 5.7e-06 31.0 29/55  
:BLT:SWISS 1->235 MALR_BACSU e-131 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB15142.1 GT:GENE yufM GT:PRODUCT two-component response regulator [YufL] GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 3238751..3239458 GB:FROM 3238751 GB:TO 3239458 GB:DIRECTION + GB:GENE yufM GB:PRODUCT two-component response regulator [YufL] GB:FUNCTION 16.3: Control GB:NOTE Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 11717295, 12949159; Product type r: regulator GB:PROTEIN_ID CAB15142.1 GB:DB_XREF GOA:O05251 HSSP:1QMP InterPro:IPR001789 SubtiList:BG12348 UniProtKB/Swiss-Prot:O05251 GB:GENE:GENE yufM LENGTH 235 SQ:AASEQ MINVLIVEDDPMVGELNKRYLSQIDGFQLKGIASSFQSALHILGEHHIDLILLDIYMPGKNGLELLTELRAQNEAVDVIVISAASELDVIKKTLRYGAVDYLIKPFEFERFQTALSDYRRKQKVYSTHRNMSQKELDAELFQKKEATEKVQLPKGLTKSTLKLIWSSIQSFENESFTTEDLAKHTEISQVSIRKYLKFLEDIQVLNVEMAYGTIGRPVFQYNVNNSNINGIKQYL GT:EXON 1|1-235:0| SW:ID MALR_BACSU SW:DE RecName: Full=Transcriptional regulatory protein malR;AltName: Full=Malate response regulator; SW:GN Name=malR; Synonyms=yufM; OrderedLocusNames=BSU31530; SW:KW Activator; Complete proteome; Cytoplasm; DNA-binding; Phosphoprotein;Transcription; Transcription regulation;Two-component regulatory system. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->235|MALR_BACSU|e-131|100.0|235/235| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| GO:SWS GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|Two-component regulatory system| BL:PDB:NREP 1 BL:PDB:REP 4->118|1srrC|2e-14|32.7|113/121| RP:PDB:NREP 2 RP:PDB:REP 2->140|3cz5B|1e-24|19.0|137/140| RP:PDB:REP 172->217|3bp8A|2e-04|19.6|46/381| RP:PFM:NREP 1 RP:PFM:REP 4->115|PF00072|1e-18|42.7|110/111|Response_reg| HM:PFM:NREP 2 HM:PFM:REP 4->115|PF00072|5.4e-28|42.3|111/112|Response_reg| HM:PFM:REP 174->202|PF08279|5.7e-06|31.0|29/55|HTH_11| GO:PFM:NREP 3 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 1 RP:SCP:REP 2->115|1a0oA|6e-24|27.4|113/128|c.23.1.1| HM:SCP:REP 1->190|1s8nA_|8.8e-36|30.9|188/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 4288 OP:NHOMOORG 753 OP:PATTERN -----------------------12-----1---2--------24--A-22-4--------------- 76832-2422221111111-141114111111766623442524221-144-545111--23123456441-------1-222-246767D3-311---33G376P4J3D1---------1111-1--41-22241888A7312B353983331211---11-52-36795-1-1---1----441-1111139IIJIKJHF9HEJJJEEG9997GHL57AE732443446Ml1--------------1--223-21111-1-1111133---12111155531-1455222122212223333333333323311---1113AH68Q777879878979882575ND52337C58DG86747576322B2345642111211111-7451234722333133332221-33633536132-53321123424314132-1-3-33244333333332--12545----------11211112222-22-----1-222135535989A9786665DDBA878849B789GCD--6845555494686357236481-111111142148C3LRE64K91AG99A-NHPHEFLAB5697867I61353222223-2-------8D46B22ED54557644696887265BCB699557B7--2-214------D69B654BBBCBAACBB-BCCBCBCBBCBCBABAAA8EFD89333BABBABBAABABBBBB8989998B2-666677765777--1233343111131A57----1--11111---21122111-284ECFEBBHD8EDHECDCE-----1---5656EAAAAA78ABC43424223231111--8-445566--------1----------------------------4-1224322-81 ----------------------------------------------1---------------------------------------------------------------------------------------------------------------1--------------2---------1-3124--1--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 217 STR:RPRED 92.3 SQ:SECSTR cEEEEEEcccHHHHHHHHHHHHTcTTEEEEEEEccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHcTTccEEEEEccccHHHHHHHHHHTccEEEETTccTTHHHHHHHHHHTTccEEcHHHHHHHHHHHHHHTTcHHHHHHccTTTTccHHHHHHHHHHHTTccHccGGGHHHHHHHTccHHHHHHHHHHHHHEEEccccEEEccTTEE################## DISOP:02AL 122-133| PSIPRED ccEEEEEEccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEccccccEEEEEEcccccccccccc //