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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yukF
DDBJ      :yukF         putative transcriptional regulator
Swiss-Prot:YUKF_BACSU   RecName: Full=Uncharacterized protein yukF;

Homologs  Archaea  0/68 : Bacteria  71/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:422 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   26->146 2b18A PDBj 2e-09 17.4 %
:RPS:PFM   30->142 PF06018 * CodY 3e-05 29.7 %
:HMM:PFM   29->170 PF06018 * CodY 3.7e-11 21.8 142/177  
:HMM:PFM   372->393 PF02954 * HTH_8 4.6e-05 40.9 22/42  
:HMM:PFM   212->266 PF08824 * Serine_rich 0.00055 23.6 55/159  
:BLT:SWISS 1->422 YUKF_BACSU 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB15180.2 GT:GENE yukF GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION 3276955..3278223 GB:FROM 3276955 GB:TO 3278223 GB:DIRECTION + GB:GENE yukF GB:PRODUCT putative transcriptional regulator GB:FUNCTION 16.3: Control GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr: putative regulator GB:PROTEIN_ID CAB15180.2 GB:DB_XREF SubtiList:BG12379 UniProtKB/Swiss-Prot:P71073 GB:GENE:GENE yukF LENGTH 422 SQ:AASEQ MSKRNQARKVGRFMTMPNDPFKYSFDRLEDVADHISDVLRCPITIEDVNHKLLAYSTHSDCTDPARTSTIIGRRVPEKVINKLWKDGTIPALLKTDQPIRVKQIDEVGLSNRVAISIWKNKQVLGFIWALEIQKTLSDEDLLTLQMAAKAVKNKLLKLQIRKTKNEERSQEFFWKMLTGHIHQEDDMADGFHKLGMAAPSEFSVMIIRINGELTEKIEQQLQYLQETTQQVYVLLATVDSNELIILTSPKTDHPFQDLKQFALSTQKQLKERYKIEDVSIAFGGIYNSISFVSRSYQEALSVLKTKERFAEETKHLFSFSELGIYQYLDVLNEKRKQAGHYNYSLSKLEQYDRDHQSNMVETLERFIEADSNVNTASKLLNIHVNTLNYRLKRISQIAEIDLKNVNQKFTIYLDIKLRHMDL GT:EXON 1|1-422:0| SW:ID YUKF_BACSU SW:DE RecName: Full=Uncharacterized protein yukF; SW:GN Name=yukF; OrderedLocusNames=BSU31920; SW:KW Complete proteome. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->422|YUKF_BACSU|0.0|100.0|422/422| SEG 147->158|aakavknkllkl| SEG 218->233|eqqlqylqettqqvyv| RP:PDB:NREP 1 RP:PDB:REP 26->146|2b18A|2e-09|17.4|121/155| RP:PFM:NREP 1 RP:PFM:REP 30->142|PF06018|3e-05|29.7|111/177|CodY| HM:PFM:NREP 3 HM:PFM:REP 29->170|PF06018|3.7e-11|21.8|142/177|CodY| HM:PFM:REP 372->393|PF02954|4.6e-05|40.9|22/42|HTH_8| HM:PFM:REP 212->266|PF08824|0.00055|23.6|55/159|Serine_rich| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF06018|IPR010312| GO:PFM GO:0005525|"GO:GTP binding"|PF06018|IPR010312| GO:PFM GO:0016564|"GO:transcription repressor activity"|PF06018|IPR010312| OP:NHOMO 108 OP:NHOMOORG 71 OP:PATTERN -------------------------------------------------------------------- ----2--------------------2-----------211------------1-1-------2-2-42--1-----------------------------------------------------------------11111---------------------------------------------------12-----------1---212222--11122111------21--------------------1--------------1------------------------------------------------------1212-------------22-11121----12--67-1-----3--11----------------------------------------------------------------------------------------------------------------------------------------------111-----1111-1--------------------------------------------------------------------------------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------------------------11---------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 121 STR:RPRED 28.7 SQ:SECSTR #########################ccHHHHHHHHHHHHTcEEEEEETTccEEEEEcccccccHHHHHHHHHTcccHHHHHHHTTccccEEEEcTTcTTccccGGTTTTEEEEEEEEEccccEEEEEEEEEEcccccHHHHHHHHH#################################################################################################################################################################################################################################################################################### DISOP:02AL 9-14,17-18| PSIPRED cccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccEEEEcccccEEEEcccccccccHHHHHHccccccHHHHHHHHHccHHHHHHcccccEEEEEccccccccEEEEEEEcccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccEEEEEEEccccHHHHHHHHHHHHHHcccccEEEEEEEccEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccc //