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Bacillus subtilis subsp. subtilis str. 168 (bsub0)
Gene : yunD
DDBJ      :yunD         putative nuclease/nucleotidase/phosphoesterase
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  300/915 : Eukaryota  41/199 : Viruses  0/175   --->[See Alignment]
d.114.1d.159.1
:462 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   7->424 3iveA PDBj 2e-21 28.0 %
:RPS:PDB   4->460 3c9fB PDBj 7e-38 16.0 %
:RPS:SCOP  4->275 2z1aA2  d.159.1.2 * 5e-24 24.8 %
:RPS:SCOP  276->462 1ho5A1  d.114.1.1 * 9e-26 18.3 %
:HMM:SCOP  4->279 1hp1A2 d.159.1.2 * 2.1e-69 35.7 %
:HMM:SCOP  276->462 1hp1A1 d.114.1.1 * 6.3e-28 27.8 %
:RPS:PFM   129->219 PF09587 * PGA_cap 2e-04 31.1 %
:RPS:PFM   294->424 PF02872 * 5_nucleotid_C 3e-10 35.6 %
:HMM:PFM   283->428 PF02872 * 5_nucleotid_C 1.2e-19 31.7 120/151  
:HMM:PFM   6->205 PF00149 * Metallophos 6.9e-06 13.9 180/200  
:BLT:SWISS 41->360 YHCR_BACSU 1e-21 29.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID CAB15227.1 GT:GENE yunD GT:PRODUCT putative nuclease/nucleotidase/phosphoesterase GT:DATABASE GIB00011CH01 GT:ORG bsub0 GB:ACCESSION GIB00011CH01 GB:LOCATION complement(3323670..3325058) GB:FROM 3323670 GB:TO 3325058 GB:DIRECTION - GB:GENE yunD GB:PRODUCT putative nuclease/nucleotidase/phosphoesterase GB:FUNCTION 16.11: Scavenge (Catabolism) GB:NOTE Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme GB:PROTEIN_ID CAB15227.1 GB:DB_XREF GOA:O32133 InterPro:IPR011240 SubtiList:BG13978 UniProtKB/TrEMBL:O32133 GB:GENE:GENE yunD LENGTH 462 SQ:AASEQ MKEKLRLYHTNDLHSHFENWPKIVDYIEQKRKEHQSDGEETLVFDIGDHLDRFQFVTEATFGKANVDLLNRLHIDGAAIGNNEGITLPHEELAALYDHAEFPVIVSNLFDKNGNRPSWAVPYHIKSLKNGMSIAFLGVTVPYYPVYDKLGWTVTDALESIKETILEVKGQADIIVLLSHLGILDDQAVAEAVPEIDVILESHTHHLLEDGQVVNGVLLASAEKYGHYVGCVEITVDSVQRSINSKTASVQNMAEWTGESAETKAFLNEKEREAEEKLSDAVAELAQDAEVKWFEESELPLLLAYALKEWCETDISMVNSGVILGPLKAGPVTKLDLHRICPHPINPVAVRLTGEELKETIVHAASEQMEQLRIKGLGFRGEVMGKMVYAGVEVETKRLDDGITHVTRITLNGEDIEKHKQYSVAVLDMFTLGKLFPLIRDAAEKEYFMPEFLRDLLAWKLAQ GT:EXON 1|1-462:0| BL:SWS:NREP 1 BL:SWS:REP 41->360|YHCR_BACSU|1e-21|29.6|311/1217| BL:PDB:NREP 1 BL:PDB:REP 7->424|3iveA|2e-21|28.0|389/487| RP:PDB:NREP 1 RP:PDB:REP 4->460|3c9fB|7e-38|16.0|445/540| RP:PFM:NREP 2 RP:PFM:REP 129->219|PF09587|2e-04|31.1|90/237|PGA_cap| RP:PFM:REP 294->424|PF02872|3e-10|35.6|118/158|5_nucleotid_C| HM:PFM:NREP 2 HM:PFM:REP 283->428|PF02872|1.2e-19|31.7|120/151|5_nucleotid_C| HM:PFM:REP 6->205|PF00149|6.9e-06|13.9|180/200|Metallophos| GO:PFM:NREP 2 GO:PFM GO:0009166|"GO:nucleotide catabolic process"|PF02872|IPR008334| GO:PFM GO:0016787|"GO:hydrolase activity"|PF02872|IPR008334| RP:SCP:NREP 2 RP:SCP:REP 4->275|2z1aA2|5e-24|24.8|266/302|d.159.1.2| RP:SCP:REP 276->462|1ho5A1|9e-26|18.3|169/188|d.114.1.1| HM:SCP:REP 4->279|1hp1A2|2.1e-69|35.7|272/0|d.159.1.2|1/1|Metallo-dependent phosphatases| HM:SCP:REP 276->462|1hp1A1|6.3e-28|27.8|169/0|d.114.1.1|1/1|5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain| OP:NHOMO 525 OP:NHOMOORG 350 OP:PATTERN -----------------------1111----1--1--------12-2--------------------- --2-------1--------------------------------------11-111-----11--------------------11111111-1--11---11113---1----------------------------111-----1------------------21--1---------------11-11112123224344453545554333333555131132111111133111111111111111211222112112-22211--111--111123122-----22-------------------------111111111-411--------1-211--122212----------------1-111-2----------------111-------1-------------1--1-1-11--111111111111-----2111111111-------------1-1---------------------------------------------------------------------------------------1---1---------------11---2--11---1---1----1----2-11---1-------1--1-----1--12--111-----111111111--111--1-1-1------1---------1---1---3-333-------332-3--31-----11-121---122222221212222-2------------------------------1111--1-1111-1---1-----1---------------------------------------23222222214-2-----------------13--------------1--------11------------1----1111211111--1 ------1------1-11111----------------------------11111111111111------------------------------11---------------23-----11-------1---------------------------1-----11-21---612----1-12-----------1--1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 460 STR:RPRED 99.6 SQ:SECSTR ccEcEEEEEEcccTTcTTcccccGGGHHHHHHHHHHTTcEEEEEEccccccccHHHHccccTTTTHHHHTTccccEEcccGGGcHHHHHHHHHTHHHHTTTTcccccEEEEcTTccEEEccEEEEcTTTccEEEEEEcccccccccTTEEEccHHHHTTcHHHHHHTTccccEEEEEccccccTTTcHHHHHHHEEEEEEcccccEcEEEEEETTEEEEEEccTTcEEEEEEEcccccHHHHEEEEEEEccHHHHHHHHTccTTcccHHHHHHHHHHHHHHHHTTTTccccTTcTTcHHHHGGGccccTTccEEEEEEGGGcccccccEEEEHHHHHHHccccccEEEEEEEHHHHTTHHHHHHccccccccTTTTccccccccccTETccccccTTccEEcccccTTcccccccccEEccccccccEEccccccccEEEEEEcccccccEEEEEEEGGG## PSIPRED ccEEEEEEEEEccHHHcccHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHccccEEEcccHHHHcccHHHHHHHHHHccccEEEEEEEEccccccccccccEEEEEcccEEEEEEEEcccHHccccccccEEccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHcccccEEEEcccccEEcccEEEccEEEEEEcccccEEEEEEEEEEccccEEEEEEcEEccccccccccHHHHHHHHHHHHHHHHHHccEEEEEccccEEEEcccccHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHcccccEEEEEEEcHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEEEEcccccccEEEEEEEccEEcccccEEEEEEEEEEccccccccEEEcccEEEcccHHHHHHHHHHHcc //