[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF52967.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  910/915 : Eukaryota  190/199 : Viruses  10/175   --->[See Alignment]
a.250.1c.52.1d.122.1d.14.1d.173.1e.11.1
:684 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->420 1ei1A PDBj 2e-80 44.1 %
:BLT:PDB   458->661 2zjtA PDBj 2e-76 78.1 %
:RPS:PDB   19->418 3cwvB PDBj 4e-92 25.8 %
:RPS:PDB   438->679 1bgwA PDBj 2e-65 29.1 %
:RPS:SCOP  7->175 1j6rA  d.173.1.2 * 6e-40 11.5 %
:RPS:SCOP  125->348 2j0nA1  a.250.1.1 * 5e-33 13.4 %
:RPS:SCOP  340->652 1dc1A  c.52.1.11 * 7e-88 13.2 %
:HMM:SCOP  7->218 1s16A2 d.122.1.2 * 1.4e-67 51.7 %
:HMM:SCOP  265->436 1kijA1 d.14.1.3 * 1.9e-59 47.7 %
:HMM:SCOP  438->679 1bjtA_ e.11.1.1 * 1e-85 55.5 %
:RPS:PFM   46->99 PF04268 * SoxG 1e-04 38.9 %
:RPS:PFM   265->432 PF00204 * DNA_gyraseB 8e-51 53.9 %
:RPS:PFM   462->564 PF01751 * Toprim 1e-14 45.0 %
:RPS:PFM   612->672 PF00986 * DNA_gyraseB_C 2e-17 62.3 %
:HMM:PFM   265->434 PF00204 * DNA_gyraseB 1.2e-64 53.3 169/173  
:HMM:PFM   611->672 PF00986 * DNA_gyraseB_C 7.3e-29 62.9 62/65  
:HMM:PFM   35->172 PF02518 * HATPase_c 7.5e-21 28.8 104/111  
:HMM:PFM   463->562 PF01751 * Toprim 4.7e-09 25.0 72/96  
:BLT:SWISS 3->684 GYRB_MYCSM 0.0 67.9 %
:PROS 466->474|PS00177|TOPOISOMERASE_II
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF52967.1 GT:GENE BAF52967.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 5435..7489 GB:FROM 5435 GB:TO 7489 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF52967.1 LENGTH 684 SQ:AASEQ MANTEHNYDASSITILEGLEAVRKRPGMYIGSTGPRGLHHLIWEVVDNSVDEAMAGHATKVEVTLLEDGGVQVVDDGRGIPVDMHPSGAPTVQVVMTQLHAGGKFDSDSYAVSGGLHGVGISVVNALSTRVEADIKLHGKHWYQNFEKSVPDELIEGGNARGTGTTIRFWPDAEIFETTEFDFETISRRLQEMAFLNKGLTITLTDNRATDEELELEALAEQGETATELSLDEIDNETELVEETTDAPKKPKKREKKKIFHYPNGLEDYVQYLNRSKTNIHPSIVSFEAKGDDHEVEVAMQWNSSYKESVHTFANTINTREGGTHEEGFRSALTSLMNRYAREHKLLKEKEANLTGDDCREGLSAVISVRVGDPQFEGQTKTKLGNTEIKSFVQRMANEHIGHWLEANPAEAKVIINKAVGSAQARLAARKARDLVRRKSATDLGGLPGKLADCRSKDPEKSELYIVEGDSAGGSAKSGRDSMFQAILPLRGKILNVEKARLDKVLKNAEVQAIITALGTGIHDEFDINKLRYHKIVLMADADVDGQHIATLLLTLLFRFMPDLVAEGHVYLAQPPLYKLKWQRGEPGFAYSDEERDEQLNEGLAAGRKINKDDGIQRYKGLGEMNASELWETTMDPTVRILRRVDITDAQRADELFSILMGDDVVARRSFITRNAKDVRFLDI GT:EXON 1|1-684:0| BL:SWS:NREP 1 BL:SWS:REP 3->684|GYRB_MYCSM|0.0|67.9|666/675| PROS 466->474|PS00177|TOPOISOMERASE_II|PDOC00160| SEG 68->77|dggvqvvddg| SEG 176->185|fettefdfet| SEG 209->229|atdeelelealaeqgetatel| SEG 248->258|pkkpkkrekkk| BL:PDB:NREP 2 BL:PDB:REP 9->420|1ei1A|2e-80|44.1|367/391| BL:PDB:REP 458->661|2zjtA|2e-76|78.1|183/185| RP:PDB:NREP 2 RP:PDB:REP 19->418|3cwvB|4e-92|25.8|306/311| RP:PDB:REP 438->679|1bgwA|2e-65|29.1|234/679| RP:PFM:NREP 4 RP:PFM:REP 46->99|PF04268|1e-04|38.9|54/147|SoxG| RP:PFM:REP 265->432|PF00204|8e-51|53.9|167/169|DNA_gyraseB| RP:PFM:REP 462->564|PF01751|1e-14|45.0|100/110|Toprim| RP:PFM:REP 612->672|PF00986|2e-17|62.3|61/65|DNA_gyraseB_C| HM:PFM:NREP 4 HM:PFM:REP 265->434|PF00204|1.2e-64|53.3|169/173|DNA_gyraseB| HM:PFM:REP 611->672|PF00986|7.3e-29|62.9|62/65|DNA_gyraseB_C| HM:PFM:REP 35->172|PF02518|7.5e-21|28.8|104/111|HATPase_c| HM:PFM:REP 463->562|PF01751|4.7e-09|25.0|72/96|Toprim| GO:PFM:NREP 10 GO:PFM GO:0003677|"GO:DNA binding"|PF00204|IPR013506| GO:PFM GO:0003918|"GO:DNA topoisomerase (ATP-hydrolyzing) activity"|PF00204|IPR013506| GO:PFM GO:0005524|"GO:ATP binding"|PF00204|IPR013506| GO:PFM GO:0005694|"GO:chromosome"|PF00204|IPR013506| GO:PFM GO:0006265|"GO:DNA topological change"|PF00204|IPR013506| GO:PFM GO:0003677|"GO:DNA binding"|PF00986|IPR002288| GO:PFM GO:0003918|"GO:DNA topoisomerase (ATP-hydrolyzing) activity"|PF00986|IPR002288| GO:PFM GO:0005524|"GO:ATP binding"|PF00986|IPR002288| GO:PFM GO:0005694|"GO:chromosome"|PF00986|IPR002288| GO:PFM GO:0006265|"GO:DNA topological change"|PF00986|IPR002288| RP:SCP:NREP 3 RP:SCP:REP 7->175|1j6rA|6e-40|11.5|165/197|d.173.1.2| RP:SCP:REP 125->348|2j0nA1|5e-33|13.4|164/171|a.250.1.1| RP:SCP:REP 340->652|1dc1A|7e-88|13.2|288/310|c.52.1.11| HM:SCP:REP 7->218|1s16A2|1.4e-67|51.7|209/213|d.122.1.2|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| HM:SCP:REP 265->436|1kijA1|1.9e-59|47.7|172/172|d.14.1.3|1/1|Ribosomal protein S5 domain 2-like| HM:SCP:REP 438->679|1bjtA_|1e-85|55.5|236/760|e.11.1.1|1/1|Type II DNA topoisomerase| OP:NHOMO 1969 OP:NHOMOORG 1132 OP:PATTERN -----------------------111111111-----------1111111111--------111---- 1111211111111111112-12111311111122221111212122222222222222222222221223222222221111111111222212222112222222222222222222222222211111111111111111111111111111111111111111111111111111111111111111112222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222322222234222222212122222222222221222222222111221122111121111111111113222222222222222222222222222222222-22223222222222222222222222222222222222222222222222222221111111111112222222222222111112222222222222222222222222222222232222222222222222222222221121222222222111222112121111111111111111111111122111111111111111111111111111222222222222222222222222222222221-2222211111122222222222222222-22122222222222222222222222222222222222222222222222221222222222222112222222222222222222222222212222222222222222222222222222222222222222222222222222222222222222222222222212222222222222221211112-22222222222222222221111111111122 22-1211141211121111111111111111111111111-111111111111111111111111111-111111111111-111111-12112111111111111115212223342212222221319F2-426122221223222122-13-422213-12121111343123222F2222252391533443222 ---11--------------1---------------111-1----------------------------------------------------------------------------------------------------------------------------------111-- STR:NPRED 657 STR:RPRED 96.1 SQ:SECSTR #####ccccGGGcccccTHHHHHHcHHHHHccccHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEcTTccEEEEEccccccEEEEEcccHHHHHHTEEEEEEEEcccccccccccccccHHHHHHHTEEEEEEEEEETcccEEEEEETTEEccccccccccccEEEEEEEEcTTTcccccccHHHHHHHHHHHHHHcTTcEEEEEETTEEEEEE###############cETTHTTEEEccEEEEccTHH#######HEEEcTTHHHHHHHHHHTTccccccccEEEEEEETTEEEEEEEEEccccccEEEEEETTEEcTTccHHHHHHHHHHHHHHHHHHTccGcccGGGGGccHHHHTTTEEEEEEEEccGGGcccccTTccccTTHHHHHHHHHHHHHHHHHTTcTTHHHHHTTcccHHHHHHHHHcHHHHHHHHHHHHHHEcTTTTTTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEETTcTTcccEEEcccccTTGGGGEEEEEEEEEEEEEEEEEEETTTTEEEEEEEEEcccccGGGEEEEEEEEccccHHHHHHHHHHHHHHHHHEEHHHHHHHHTTccHHHHHHccEEEEEEccccHHHHHHHHHHHHHTcccEEEETTcHHHHHHHHHHHHcccTTTcccHHHHHHHHHHHHTTcHHHHH DISOP:02AL 1-12,428-450| PSIPRED cccccccccHHHEEEccccHHHHHccccEEcccccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEccEEccccccccccEEEEEEEEEEEcccccccccEEEccccccccEEEEEEcccEEEEEEEEccEEEEEEEEcccccccEEEEcccccEEEEEEEEcHHHcccccccHHHHHHHHHHHHccccccEEEEEEEEccccccccccccccccccccccccccccccHHHHHcccccccccccccEEEEEccccHHHHHHHHHccccccccccEEEEEEcccEEEEEEEEEccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEcccccHHHHcccccccEEEccccccccccccccHHHHHccHHHHHHHHHHcccccccccHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEccEEEEEEccccEEEEccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHcHHHHEEEcccccHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccc //