[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF52998.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  41/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.1.8
:369 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   63->133 1kwgA PDBj 9e-05 32.4 %
:BLT:PDB   163->356 1w91A PDBj 2e-07 27.6 %
:RPS:PDB   55->257 1ceoA PDBj 2e-11 18.3 %
:RPS:SCOP  73->307 1gzjA  c.1.8.3 * 4e-15 13.2 %
:HMM:SCOP  44->355 1w91A2 c.1.8.3 * 9.7e-59 29.4 %
:RPS:PFM   77->131 PF02449 * Glyco_hydro_42 5e-04 34.5 %
:RPS:PFM   163->203 PF01229 * Glyco_hydro_39 2e-06 43.9 %
:HMM:PFM   58->303 PF00150 * Cellulase 1.7e-15 18.8 239/287  
:HMM:PFM   264->344 PF00332 * Glyco_hydro_17 5e-05 22.2 81/310  
:BLT:SWISS 86->230 XYNB_THESA 1e-06 29.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF52998.1 GT:GENE BAF52998.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 43027..44136 GB:FROM 43027 GB:TO 44136 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF52998.1 LENGTH 369 SQ:AASEQ MGFLHPRYLAWRATLLTLLVIALVGGVVGRVVVVSLESNEAMVKDKALDRCDSLGIAGPMSWENMTSEEFHVMVNEMADIGASWIRIGVIWRDVEPSSGNFKWDDLDERLQLAVDAGLRPLLLIHTTPSWIDDVGEVGNGTAQEYARFSGEVAKRYHDQAEGYEIWNEPNLDRFWPKPSPESYAELLTATAPLLRQIDPDAEIVAAGLAPAASIEEYSVTIEDFLRGLYDLDALQDVTAIGIHPYSYPEMPSGTSSWNTFAQLPRIQAIMHSYGDREREIWLTEYGAPSEGNGGVGLELQSDMIVEALQMTEDGDNFGPIFIYTMYDIDFDPEDRESHFGLLYGPGDPKPAFLALSDATKRCSLLSDLE GT:EXON 1|1-369:0| BL:SWS:NREP 1 BL:SWS:REP 86->230|XYNB_THESA|1e-06|29.9|137/500| TM:NTM 1 TM:REGION 14->36| SEG 15->36|lltllvialvggvvgrvvvvsl| BL:PDB:NREP 2 BL:PDB:REP 63->133|1kwgA|9e-05|32.4|71/644| BL:PDB:REP 163->356|1w91A|2e-07|27.6|185/499| RP:PDB:NREP 1 RP:PDB:REP 55->257|1ceoA|2e-11|18.3|180/332| RP:PFM:NREP 2 RP:PFM:REP 77->131|PF02449|5e-04|34.5|55/339|Glyco_hydro_42| RP:PFM:REP 163->203|PF01229|2e-06|43.9|41/453|Glyco_hydro_39| HM:PFM:NREP 2 HM:PFM:REP 58->303|PF00150|1.7e-15|18.8|239/287|Cellulase| HM:PFM:REP 264->344|PF00332|5e-05|22.2|81/310|Glyco_hydro_17| GO:PFM:NREP 5 GO:PFM GO:0004565|"GO:beta-galactosidase activity"|PF02449|IPR013529| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02449|IPR013529| GO:PFM GO:0009341|"GO:beta-galactosidase complex"|PF02449|IPR013529| GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF01229|IPR000514| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01229|IPR000514| RP:SCP:NREP 1 RP:SCP:REP 73->307|1gzjA|4e-15|13.2|220/304|c.1.8.3| HM:SCP:REP 44->355|1w91A2|9.7e-59|29.4|299/0|c.1.8.3|1/1|(Trans)glycosidases| OP:NHOMO 96 OP:NHOMOORG 46 OP:PATTERN -----------------------------1-----------------1-------------------- ----1-----1--------------------------2------1-------------------------------------------------------------------------------------------86689---431------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1----------------------------------------------------------------------------------------------------------------1111--2222--1122221---1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-1112-----211------------------------------------------------------------------------------------------------- ----12-------------------------------------------------------------------------------------------------------2----------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 315 STR:RPRED 85.4 SQ:SECSTR ###############################################cTTccccccccHHHHHHHccHHHHHHHHHHHHHTccEEEEEEEGGGTcccccTTcHHHHHHHHHHHHHTTcEEEEEEEEcccccTTTcHHHHHHHHHHHHHHHHHHHHTccccEEEEcccccccTccccccccHHHHHHHHHHHHHHHHHcccccEEEEcHHHHcGEEcccccccGGGGGccccccccccEEEEEEEcccHHHHTTTcTTcEEEEccEEcTTTHHHHHHHHHHHHTTcccEEEEEEEEETTccHHHHHHHHHHHHHcTTEEEEEEccccGGGcTTGGTEGccccccTTccccHHHHHHHHHHcTc####### DISOP:02AL 1-1,368-370| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHccccccccccccccccHHHHHHHHHHccccEEEEcccHHHHccccccccHHHHHHHHHHHHHcccEEEEEEcccHHHHHHccccccccHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccccccccccEEEccccccccHHHHHHHHHHHHHHHHccc //