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Corynebacterium glutamicum R (cglu2)
Gene : BAF53000.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  122/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:507 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   449->492 3bp8B PDBj 4e-05 22.7 %
:RPS:SCOP  436->505 2fbiA1  a.4.5.28 * 5e-06 15.7 %
:HMM:SCOP  427->507 2d1hA1 a.4.5.50 * 3.6e-07 18.5 %
:HMM:PFM   452->492 PF09339 * HTH_IclR 6.1e-09 36.6 41/52  
:BLT:SWISS 160->362 RECG_THIFE 1e-22 35.8 %
:BLT:SWISS 436->505 YCGE_BACSU 2e-04 27.1 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53000.1 GT:GENE BAF53000.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(45296..46819) GB:FROM 45296 GB:TO 46819 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53000.1 LENGTH 507 SQ:AASEQ MGLSEPDFTPVEGFDSQASIQFIRAGLNPQDRDALKVEPVPHHEIHEMTVDGAEVVLVSVSPLAVNGPCYYLPGGIINGSFKRVGDEDRKLSHLEIYELQNRFVQTKTDRNPVPDSSINDLNNQLVASFKQRLVETGSRSLGTDDNWLLRKNITTPIGELTIAGLLALGSYPQQFFPRVIIDVAVHPGLHKSPIGTSIRFEDRKICEGNLLEMVQEAMTAIKRNLRVRRVVEGLSGKDVLEIPEEVLREALANAVLHRDYSELAQNEAIHVDIYKDRVEITSPGGLPNGKRPESILDGYSEPRNRVLSRILMDIPWTHEVQGVLAESNGTGVPRMFNLMREAGLPVPNFKIDISSVTVELSRHGLLDTQTNEWLVEKLGSDFSNTQGIALVLAKELGAVTPRDLRNQTGHDSEDMRSLLDALVDRGVLNQNSQNQYQLATSSVNVTQSEQEVLDAINKTTPVTIREIATKTGKTASSLRPLLRGLVEAGLVVATAPPSSRNRAYLQA GT:EXON 1|1-507:0| BL:SWS:NREP 2 BL:SWS:REP 160->362|RECG_THIFE|1e-22|35.8|193/652| BL:SWS:REP 436->505|YCGE_BACSU|2e-04|27.1|70/154| RP:PDB:NREP 1 RP:PDB:REP 449->492|3bp8B|4e-05|22.7|44/380| HM:PFM:NREP 1 HM:PFM:REP 452->492|PF09339|6.1e-09|36.6|41/52|HTH_IclR| RP:SCP:NREP 1 RP:SCP:REP 436->505|2fbiA1|5e-06|15.7|70/136|a.4.5.28| HM:SCP:REP 427->507|2d1hA1|3.6e-07|18.5|81/0|a.4.5.50|2/2|"Winged helix" DNA-binding domain| OP:NHOMO 188 OP:NHOMOORG 136 OP:PATTERN --------------------------------1-----11-1--2234114-2-2--1---------- -----3111112-1----------------------1---1-121-11------------------------111111--1-------1162--1-------1------------------------516---3-111122---1-------1----------1---1---------------11112------------------------------11-----------------1------------------1--1---------------1--------1---------1--1-------------------------1-1--------------11--------------111-1--------1--11-----------------------------------------1-----------11--2------------------------------------------------------------------------------------11-----------------------3------21-12------------1--1----2---1--------------4--1-----2------1-1-----------------221---1------------------1---1-----12-----------1---------------------------------------2--------------------------------------------------1-2--1----1---1-1--1-------------2------------------1111-111--1---------------1111---------------------------------------------1------1--11--------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 88 STR:RPRED 17.4 SQ:SECSTR ###############################################################################################################################################################################################################################################################################################################################################################################################################################ccHHHHH###HHHHHHHHHHHHTTHHHHTccHHHHHHHHHTTTcccccHHHHHHHTTccccTTTHHHHHHHTTTcEEcccccccTGGEEEE# DISOP:02AL 1-1,406-413,495-508| PSIPRED cccccccccccccccHHHHHHHHHHHHcHHHHHccccccccccEEEEEEEccEEEEEEEEcccccccccEEccccccccEEEEEccccEEccHHHHHHHHHHHccccHHHHccccccHHHccHHHHHHHHHHHHccccccccccHHHHHHHccccccccccHHHHEHHcccHHHHcccEEEEEEEEcccccccccccEEEEccccccccHHHHHHHHHHHHHHHccccEEEccccccccccccHHHHHHHHHHHHHHcccccccccccEEEEEcccEEEEEEcccccccccHHHHcccccccccHHHHHHHHHcccccccccccHHcccccHHHHHHHHHHccccccEEEEcccEEEEEEEccccccHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEcccccEEEEcccccHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEcccccccccEEcc //