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Corynebacterium glutamicum R (cglu2)
Gene : BAF53017.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  740/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
d.175.1e.3.1
:474 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   89->446 1mwxB PDBj 1e-13 26.8 %
:RPS:PDB   128->471 2c5wB PDBj 6e-37 21.7 %
:RPS:SCOP  49->134 1k25A3  d.175.1.1 * 1e-06 25.9 %
:RPS:SCOP  138->472 1mwrA3  e.3.1.1 * 7e-53 20.3 %
:HMM:SCOP  137->476 1qmeA4 e.3.1.1 * 8.7e-76 35.0 %
:RPS:PFM   158->467 PF00905 * Transpeptidase 4e-22 38.3 %
:HMM:PFM   157->468 PF00905 * Transpeptidase 4.7e-63 36.5 288/304  
:HMM:PFM   63->113 PF03717 * PBP_dimer 0.00034 27.8 36/177  
:BLT:SWISS 24->446 PBPA_MYCS2 2e-88 45.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53017.1 GT:GENE BAF53017.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(63342..64766) GB:FROM 63342 GB:TO 64766 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53017.1 LENGTH 474 SQ:AASEQ MNRSIRITSLFSLLLILVLVANLTWIQAFRDDDLAQNPLNARGFFAAKSTPRGQISTGGQVLAESSQDNQGYYQRSYITNPTTYAPVVGYFSDVYGAAGLELGYNSILNGSDSSLFTTQWLDVISGRPTHGANIELTLDPNAQQTAYEQLSQSGYEGAVVALRPSTGEVLAMASSPSFDPNQIVNPATAEDAWAEYTSAEGAPLLNHATQESLPPGSIFKIITTAAALENGYSADSTVTAEAAVTLPGTNTTLTNYGGQTCAGGGTTTLLTAFQLSCNTAFVETGIDVGADALRASAEDFGVGQTYSLGLDNVPGGLGEIPDDAALGQSSIGQRDVQMNVLQAAVMAGTVSNGGVRMEPYLVSRVTGQDLSELSTHKPKSVGGVEPEIAEQLKTLMEASERNTSGYAGIQIASKTGTAEHGDENTPPHTWYVAFNNDIAVAVLVKDGGGFGTSATGGQVAAPIGRAVLQAAGGF GT:EXON 1|1-474:0| BL:SWS:NREP 1 BL:SWS:REP 24->446|PBPA_MYCS2|2e-88|45.8|421/491| TM:NTM 1 TM:REGION 5->27| SEG 4->19|siritslfslllilvl| SEG 257->272|ggqtcagggtttllta| SEG 447->457|gggfgtsatgg| BL:PDB:NREP 1 BL:PDB:REP 89->446|1mwxB|1e-13|26.8|336/625| RP:PDB:NREP 1 RP:PDB:REP 128->471|2c5wB|6e-37|21.7|309/385| RP:PFM:NREP 1 RP:PFM:REP 158->467|PF00905|4e-22|38.3|274/289|Transpeptidase| HM:PFM:NREP 2 HM:PFM:REP 157->468|PF00905|4.7e-63|36.5|288/304|Transpeptidase| HM:PFM:REP 63->113|PF03717|0.00034|27.8|36/177|PBP_dimer| GO:PFM:NREP 2 GO:PFM GO:0008658|"GO:penicillin binding"|PF00905|IPR001460| GO:PFM GO:0009273|"GO:peptidoglycan-based cell wall biogenesis"|PF00905|IPR001460| RP:SCP:NREP 2 RP:SCP:REP 49->134|1k25A3|1e-06|25.9|85/111|d.175.1.1| RP:SCP:REP 138->472|1mwrA3|7e-53|20.3|311/330|e.3.1.1| HM:SCP:REP 137->476|1qmeA4|8.7e-76|35.0|323/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 1378 OP:NHOMOORG 743 OP:PATTERN -------------------------------------------------------------------- 2222733344443343333-3433343333334444445525462431222233222111223123378731111111312231111111111-111--1111111112----------------1222212222221134---33111111211111111111-121222112211111211211112112113333334435344422311114543-2231-1111113421111-1--1111-1-121111-122111-11111221--11--------------------------------------111111111-2435433333333334333255532422433234444532223555211111-21121211112-11-11-1111------------11211111112-------1-----11-111111111121111111112111121211--------111111111111111111111212211112222222222222222222212222111111111221222221221121122111111111221222132121111121121222223322-11-3-211211111111---111--1--1---44111122111-222222122222212212211--1222------32223222222222222-2232222222222222222333231223333333333323233422222222132222222222212112222222221221212211111111111122222222221222222222122222222---------111122222232332111111111111111121221111-----1-111--------------------------1111111111221 ------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 439 STR:RPRED 92.6 SQ:SECSTR #################################HHHTTccHHHHcTTTcHHHHHHHcTHHHHHHHHHHTTcccHHHHHHHTTcccGGGcccccTTGGGcccccTTGGGHHHHHHHHHHTccccHHHHTTccEEEEEcccHHHHHHHHHHHHcccccEEEEEEETTTccEEEEEcccccccccTcHHTTccEEcGGGHHHTTHTcccTTTccccccGGGHHHHHHHHHHHTTccccccEEEEcccccTTcccccccTccTTccccEEEEHHHHHHTTcHHHHHHHHHHHcHHHHHHHHHTTTccccccccccccHHHcccGGGGccccccccccccccccHHHHHHHHHHHHTTcEEEccccEEEEEETTccEEEccccEEEEcccHHHHHHHHHHHHHHHHHcTTGGTcccEEEEEEccccHHHHEccEEEEEEcccEEEEEEEcccTTccEEGGGGGHHHHHHHHHHHHHT## DISOP:02AL 1-3| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHcEEEEEEcHHHHHccHHHHHHHHHHccHHHEEEEccccccccccccccEEEEEcccccccHHHHHcccccccHHHHHHHHHHHHHcccccEEEEEEEccccccccccccEEEEEEcHHHHHHHHHHHHHccccEEEEEEEcccccEEEEEccccccccccccccccHHHHHHHccccccccccHHHHccccccHHHHHHHHHHHHHcccccHHHEEccccEEEccccEEEccccccccccccEEcHHHHHHHccHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHcccEEEccEEEEEEEcccccEEEccccccEEcccHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEccccccccEEEEEEcccEEEEEEEEccccccccccccHHHHHHHHHHHHHHccc //