[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF53107.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  57/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:121 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->103 2jscB PDBj 8e-32 65.9 %
:RPS:PDB   20->89 1bibA PDBj 1e-13 22.9 %
:RPS:SCOP  2->91 1fnnA1  a.4.5.11 * 4e-15 13.3 %
:HMM:SCOP  23->84 2hoeA1 a.4.5.63 * 3e-20 61.3 %
:RPS:PFM   20->64 PF01022 * HTH_5 6e-06 51.1 %
:HMM:PFM   20->64 PF01022 * HTH_5 1.2e-16 48.9 45/47  
:BLT:SWISS 1->103 CMTR_MYCTU 8e-33 62.1 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53107.1 GT:GENE BAF53107.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 161985..162350 GB:FROM 161985 GB:TO 162350 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53107.1 LENGTH 121 SQ:AASEQ MLTIASRLDVMNRLGRAMADPTRSRILLSLLESPGYPAQLAETLGLTRTNVSNHLACLRDCGIVVAEPEGRRTRYEIVDAHLARALNALVEITLAVDEDAPCLDPACPVAGCCDTEGGQQS GT:EXON 1|1-121:0| BL:SWS:NREP 1 BL:SWS:REP 1->103|CMTR_MYCTU|8e-33|62.1|103/118| BL:PDB:NREP 1 BL:PDB:REP 13->103|2jscB|8e-32|65.9|91/97| RP:PDB:NREP 1 RP:PDB:REP 20->89|1bibA|1e-13|22.9|70/294| RP:PFM:NREP 1 RP:PFM:REP 20->64|PF01022|6e-06|51.1|45/47|HTH_5| HM:PFM:NREP 1 HM:PFM:REP 20->64|PF01022|1.2e-16|48.9|45/47|HTH_5| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01022|IPR001845| GO:PFM GO:0005622|"GO:intracellular"|PF01022|IPR001845| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01022|IPR001845| RP:SCP:NREP 1 RP:SCP:REP 2->91|1fnnA1|4e-15|13.3|90/103|a.4.5.11| HM:SCP:REP 23->84|2hoeA1|3e-20|61.3|62/0|a.4.5.63|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 96 OP:NHOMOORG 58 OP:PATTERN -------------------------------------------------------------------1 -----1-31141112--11-15--2111111-323322-3-12141131111416111--1-1--1--212-------------------------------------------------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1-----------------------------------------------------------------------------------------------11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 115 STR:RPRED 95.0 SQ:SECSTR HHHHHHHHHHccccTTccHcHHHHHHHHHHTTcccccHHHHHHHTccHHHHHHHHHHHHHTTcccEEETTTEEEcccccccccHHHHHHHccTccEEEEEEEEccccccccHHHc###### DISOP:02AL 1-5,111-122| PSIPRED cccHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEEccEEEEEEccHHHHHHHHHHHHHHHccccccccccccccccccccccccccc //