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Corynebacterium glutamicum R (cglu2)
Gene : BAF53111.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  97/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1c.55.3
:363 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   36->87 1bibA PDBj 1e-04 20.4 %
:RPS:PDB   206->332 1cz9A PDBj 9e-05 12.9 %
:RPS:SCOP  36->133 1pdnC  a.4.1.5 * 4e-07 23.2 %
:HMM:SCOP  16->138 1pdnC_ a.4.1.5 * 4.8e-19 32.5 %
:HMM:SCOP  198->348 1c6vA_ c.55.3.2 * 1.2e-06 17.1 %
:RPS:PFM   36->138 PF01710 * Transposase_14 6e-04 29.0 %
:HMM:PFM   212->307 PF00665 * rve 2e-09 15.8 95/120  
:HMM:PFM   96->140 PF01418 * HTH_6 4.4e-07 33.3 45/107  
:HMM:PFM   35->72 PF01527 * Transposase_8 1.1e-06 44.7 38/76  
:BLT:SWISS 6->335 YIS5_SHISO 4e-15 28.1 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53111.1 GT:GENE BAF53111.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 167920..169011 GB:FROM 167920 GB:TO 169011 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53111.1 LENGTH 363 SQ:AASEQ MAHRGPALAPLTLTDDERDQLQRWVRRRKTTQDLALRSRIVLECATGASNSEVARRLGISLPTVGKWRARFIDKRLDGLVDEPRPGRPATIGIDRVEQVIIDTLESTPANATHWSRASMAEKSGLSKSTVGRIWKAFGLKPHLEEGLKLSNDPFFTEKIYDIVGLYLNPPESAVVLCVDEKSQVQALQRSQPAFPMMPGTPERRAHDYVRHGTTSLFAALNVADGTVISQVHRKHRSVEFRKFLVKIDKTVPEGLDVHVICDNYATHKHPTIQTWLGKHPRFHMHFTPTYSSWINQVERVFAEVTRELLQRSDHRSVQALEKDLRDWVRAWNENPKPFIWTKTAEDILDSIARSLQRINGAGH GT:EXON 1|1-363:0| BL:SWS:NREP 1 BL:SWS:REP 6->335|YIS5_SHISO|4e-15|28.1|302/343| RP:PDB:NREP 2 RP:PDB:REP 36->87|1bibA|1e-04|20.4|49/294| RP:PDB:REP 206->332|1cz9A|9e-05|12.9|124/139| RP:PFM:NREP 1 RP:PFM:REP 36->138|PF01710|6e-04|29.0|93/114|Transposase_14| HM:PFM:NREP 3 HM:PFM:REP 212->307|PF00665|2e-09|15.8|95/120|rve| HM:PFM:REP 96->140|PF01418|4.4e-07|33.3|45/107|HTH_6| HM:PFM:REP 35->72|PF01527|1.1e-06|44.7|38/76|Transposase_8| RP:SCP:NREP 1 RP:SCP:REP 36->133|1pdnC|4e-07|23.2|95/123|a.4.1.5| HM:SCP:REP 16->138|1pdnC_|4.8e-19|32.5|120/0|a.4.1.5|1/1|Homeodomain-like| HM:SCP:REP 198->348|1c6vA_|1.2e-06|17.1|146/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 404 OP:NHOMOORG 101 OP:PATTERN ------------------------------------------------1-1-3----------1---- --2-1---112--------------9----------1-C4-16H----------------67--2-E822----------------------------------------------------------------------2-----4-----C-------------1-21-------------1----------------------------------3---------------------------------------------------------------------------------------------------------1----------------------------1----D-----------------2----------L-2J--------------1-----131-2-1----1--3--11--5-----------------------------------------------------------------------1-----------44-4-1-----21-12-----A11-I1-52-1H--4----------------2---------------------1------1---34------------------------1---X4-1-----------------1----1-----------------211-----------------1--------------------2--3--1-----1-1--1-11-2--L--------------------------------------------------------------------1--1--11-------------------------------595------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 215 STR:RPRED 59.2 SQ:SECSTR ################HHHHHHTTccHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHTccHHHHHHHHHHHHHHHHTTcccEEETTTTHHHHHHHHHHHHHHHTTcc##################################################################################################EcGGGTTccEEEEEEETTTccEEEEEEccccHHHHHHHHHHH##HHHHccccEEEEEccHHHHcHHHHHHHHHHTcEEEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHTTccc#cccHHHHHHHHH############################### DISOP:02AL 1-5,8-9,23-33,80-90,360-364| PSIPRED ccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHccHHHHHccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccEEccccccccEEEEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHccEEEEEcccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHcccccc //