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Corynebacterium glutamicum R (cglu2)
Gene : BAF53115.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  219/915 : Eukaryota  1/199 : Viruses  1/175   --->[See Alignment]
a.4.1c.55.3
:383 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   68->179 1bibA PDBj 4e-04 16.4 %
:RPS:PDB   235->376 1bl3B PDBj 2e-11 12.3 %
:RPS:SCOP  60->101 1tc3C  a.4.1.2 * 6e-05 19.0 %
:HMM:SCOP  231->378 1c6vA_ c.55.3.2 * 1.2e-22 25.0 %
:HMM:PFM   235->340 PF00665 * rve 3.4e-17 21.7 106/120  
:HMM:PFM   78->101 PF08281 * Sigma70_r4_2 0.00015 45.8 24/54  
:BLT:SWISS 12->379 INSI_ECOLI 2e-87 45.7 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53115.1 GT:GENE BAF53115.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(170447..171598) GB:FROM 170447 GB:TO 171598 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53115.1 LENGTH 383 SQ:AASEQ MAKIGRPGLPQDQRQKVWDLWKTGSSISDISRDVGSPPGSIFSILLPRGGIYLPAQKHHPGTLTLAEREEISRGLSVGLSYRAIARLTGRSASTISREVTRNRGRTAYRAIDADDRSWRQARRPQRCKLAKNPVLRGYVAARLREDWSPEQIAGRLKITYACTSRMQISHESIYKSLFIQSRGVLPKDLQKHLRSRRPIRKARSNTTSGQWRSQIKDAVSISKRPKEAEARVQVGHWEGDLVIGAQQSQIATVIERATRFTRVVHVESRHAASVTAGLIRELGQLPDQAKRSLTWDRGMELAGHKEVTAGTGMTVCFADPHSPWQRGTNENTNRLLRQYFPKKTSMKGFSQTDLDQVADKLNNRPRKVLGFRTPAEQYEALLR GT:EXON 1|1-383:0| BL:SWS:NREP 1 BL:SWS:REP 12->379|INSI_ECOLI|2e-87|45.7|368/383| RP:PDB:NREP 2 RP:PDB:REP 68->179|1bibA|4e-04|16.4|110/294| RP:PDB:REP 235->376|1bl3B|2e-11|12.3|130/143| HM:PFM:NREP 2 HM:PFM:REP 235->340|PF00665|3.4e-17|21.7|106/120|rve| HM:PFM:REP 78->101|PF08281|0.00015|45.8|24/54|Sigma70_r4_2| RP:SCP:NREP 1 RP:SCP:REP 60->101|1tc3C|6e-05|19.0|42/51|a.4.1.2| HM:SCP:REP 231->378|1c6vA_|1.2e-22|25.0|144/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 1104 OP:NHOMOORG 221 OP:PATTERN -------------------------------------------------------------------- ------1-3517-4--211-12---211111-2636-388-134---4--8F-1-12----14---D2-------A7-----1------2--------------------------------------------------------------8-------------1-----------------------------------1-------3-----------1B---------5---6-2-21---22----3--N4sM3J-871197613-1343F---1-L8-----12241124152-B21C-1132151-11A8-----------------1---------E--S-----------------392----1-1111-----------1-----------------1--1E----------1111-13-133------1--2--1-------------------------------------1------------2-------3-1-6----------1--1--1i2--1D-22-14--212-13--24---------E6A7---2--2----------------------------2-------------------------------5--------6-R1228--2---------------2--------------33413---1--343--1---331111311----1-26-------------------------------------------55--4---1-----6----------1-1---8---------------2-----13---k---------A--1------1-81------1ffi--------22------------3------------3-------6-2----------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------ STR:NPRED 252 STR:RPRED 65.8 SQ:SECSTR ###################################################################HHHHHHHHTTcccHHHHHHHHTccHHHHHHcEEETTTEEEcccccccccHHHHHHTcccccEEEccEEc##cHHHHHHHHGGGccTTcEEEEcEEcccccccTcEEEEEEEE#######################################################TEEEEEEEEETTEEEEEEEEETTTccEEEEEEccccHHHHHHHHHHHHHHccccEEEcEcccTTTTcHHHHHHHHHHTcEEEccHHHHHHHHHHHHHHHHTTcccHccHGGGcccHHHHHHHHHHHHHHcccTTTTcccHHH####### DISOP:02AL 1-6,120-129,194-212| PSIPRED ccccccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccccccccccccccccHHHccccHHHHHccccEEEEEEEEcccEEEEEEEEcccccEEEEEcccccHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHccEEEEccccccHHcccHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHcccHHHHccccHHHHHHHHcc //