[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF53213.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  145/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.81.1
:409 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   85->213 3e18B PDBj 1e-07 27.0 %
:RPS:PDB   36->386 3dtyD PDBj 1e-23 17.4 %
:RPS:SCOP  36->114 1ebfA1  c.2.1.3 * 7e-09 11.4 %
:RPS:SCOP  140->315 2nvwA2  d.81.1.5 * 3e-17 11.2 %
:HMM:SCOP  6->172 1ofgA1 c.2.1.3 * 5.1e-41 37.2 %
:HMM:SCOP  140->306 2nvwA2 d.81.1.5 * 2.1e-23 30.8 %
:RPS:PFM   35->114 PF01408 * GFO_IDH_MocA 7e-10 36.7 %
:RPS:PFM   148->207 PF02894 * GFO_IDH_MocA_C 6e-08 40.7 %
:HMM:PFM   6->125 PF01408 * GFO_IDH_MocA 4.7e-28 35.7 112/120  
:HMM:PFM   148->214 PF02894 * GFO_IDH_MocA_C 1.8e-08 26.2 65/115  
:HMM:PFM   354->382 PF11459 * DUF2893 0.00045 41.4 29/69  
:BLT:SWISS 33->227 NTDC_BACSU 6e-13 28.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53213.1 GT:GENE BAF53213.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 269842..271071 GB:FROM 269842 GB:TO 271071 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53213.1 LENGTH 409 SQ:AASEQ MTQQELRVAVIGAGMAGKAHAAGYRTASSIYSTTLPNIRLVSIADANVQLAEETAARFGFERFDTSWQAIVEADDIDVVSVVVANFLHREIVEALLASGKHVLCEKPLSDTIEDAEAMIEAAGRAATNGTIARIGLTYRRSPGVAHIRDLVQSGELGKVLHVTGHYWTDYGSNAQAPISWRYKGPNGSGALADVGSHLTYLAEFVAGSDFADVRGGQLSTVITERPKPLGAIVGHEGGAVSDEYEAVENDDIASFSGSFISGGTATLQVGRISQGHPNTLGFEVFCEKGSVLFDFRNSGEFKIFTPATSGDISQEAGYRTITIGPKHPYWRGGLAMDAPGVGIGQNEGFVFQARAFLEEIAGIPEEESLPRCATLEEGLHNMQLIDAVAQSAAADGATVAVPVLAPVQN GT:EXON 1|1-409:0| BL:SWS:NREP 1 BL:SWS:REP 33->227|NTDC_BACSU|6e-13|28.7|188/350| SEG 12->23|gagmagkahaag| SEG 69->84|aiveaddidvvsvvva| SEG 115->126|aeamieaagraa| SEG 250->266|ddiasfsgsfisggtat| SEG 387->403|avaqsaaadgatvavpv| BL:PDB:NREP 1 BL:PDB:REP 85->213|3e18B|1e-07|27.0|122/337| RP:PDB:NREP 1 RP:PDB:REP 36->386|3dtyD|1e-23|17.4|298/349| RP:PFM:NREP 2 RP:PFM:REP 35->114|PF01408|7e-10|36.7|79/119|GFO_IDH_MocA| RP:PFM:REP 148->207|PF02894|6e-08|40.7|59/107|GFO_IDH_MocA_C| HM:PFM:NREP 3 HM:PFM:REP 6->125|PF01408|4.7e-28|35.7|112/120|GFO_IDH_MocA| HM:PFM:REP 148->214|PF02894|1.8e-08|26.2|65/115|GFO_IDH_MocA_C| HM:PFM:REP 354->382|PF11459|0.00045|41.4|29/69|DUF2893| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01408|IPR000683| GO:PFM GO:0008152|"GO:metabolic process"|PF02894|IPR004104| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02894|IPR004104| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02894|IPR004104| RP:SCP:NREP 2 RP:SCP:REP 36->114|1ebfA1|7e-09|11.4|79/168|c.2.1.3| RP:SCP:REP 140->315|2nvwA2|3e-17|11.2|170/178|d.81.1.5| HM:SCP:REP 6->172|1ofgA1|5.1e-41|37.2|156/220|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 140->306|2nvwA2|2.1e-23|30.8|159/0|d.81.1.5|1/1|Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain| OP:NHOMO 264 OP:NHOMOORG 153 OP:PATTERN ----------------11------1--1--1------------------------------------- -12-2---111--------------------------1232---113--11-445--1-----2212221------------2--------------------11--41----------------111-1-111-11--55---1--------------------------------------11------2-----------------2211-1----1------------51-----------------------------------------------------------------------------------------1---------------------------1--------------3112-----1---------1------------22222222222-1---1-1-13--622166766733---1-232----32---------111--------------------------------------------------1-------11--------1----------------------------------------------------------------------1-------------------------------------------------------------------------1--111-------------------------------2211111-----------------1---------111111111111---------------1-2---111-----111-----------1------1-1------1-1------------------------11------------------------------------------------------------------1--1- -------------1--------------------------------------------------------------------------------11------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 386 STR:RPRED 94.4 SQ:SECSTR cccccEEEEEEccccccccGHHHGGTHHHHHHHTccEEEEEEEccccHHHHHHHHHHTTcccHHHHHHHTTcTTcccEEEEEccGGGHHHHHHHHHHTTcEEEEcccccccHHHHHHHHHHHHHHHHTTccEEEccGGGGcHHHHHHHHHHHTTTTccEEEEEEEccEEEEEEEccccTTTTTccccccHHHHTTHHHHHHHHHcTTccEEEEEEEEcccGGGTTcccEEEEEEETTccEEEEEEccTTcccEEEETTTTEEEEEEETTcEcccTTcccEEEEEEEccEEEEEETTcTTEEEEEETTcccEEEETTTTccHHEEEcccEEHHTTccccTTccccHHHHHHHHHHHHHHHHHHTTcccTTcccccHHHHHHHHHHHH####################### DISOP:02AL 1-2,407-410| PSIPRED cccccEEEEEEcccHHHHHHHHHHHHccHHHHHcccccEEEEEEcccHHHHHHHHHHccccEEEccHHHHHccccccEEEEEcccHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHccccccEEEEEEEEEccccccccccccccccHHHcccEEEHHHHHHHHHHHHHHccccEEEEEEEEEEcccccccccccccccccccccccccccccccEEEEEEEEccccEEEEEEEEEEccccccEEEEEEEccEEEEEEEEccccEEEEccccccccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccccc //