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Corynebacterium glutamicum R (cglu2)
Gene : BAF53329.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  829/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
d.11.1d.2.1e.3.1
:795 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   61->678 3dwkB PDBj 7e-32 28.7 %
:RPS:PDB   56->668 3dwkB PDBj 3e-79 24.2 %
:RPS:SCOP  56->271 2oluA1  d.2.1.10 * 9e-64 34.8 %
:RPS:SCOP  292->668 2c5wB1  e.3.1.1 * 1e-32 19.8 %
:RPS:SCOP  695->750 1k25A1  d.11.1.1 * 2e-04 18.0 %
:HMM:SCOP  234->673 2bg1A1 e.3.1.1 * 3.6e-69 33.4 %
:RPS:PFM   69->252 PF00912 * Transgly 1e-43 51.7 %
:RPS:PFM   393->632 PF00905 * Transpeptidase 1e-17 37.3 %
:HMM:PFM   67->252 PF00912 * Transgly 6e-62 50.0 174/178  
:HMM:PFM   360->619 PF00905 * Transpeptidase 6.5e-24 27.2 243/304  
:HMM:PFM   695->750 PF03793 * PASTA 6.7e-09 35.7 56/63  
:BLT:SWISS 61->633 PBPF_BACSU 8e-46 31.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53329.1 GT:GENE BAF53329.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(399143..401530) GB:FROM 399143 GB:TO 401530 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53329.1 LENGTH 795 SQ:AASEQ MSTTNSLTKLVASTVAAGVLGALALVPFASLSGVAVARTNDTMQTNLSDLTDGRGPGVTTITDSTDQPIAYIYAQRRFEVGGDQISTSMKDAIVSIEDRRFYEHDGVDLQGFGRAILTNLVAGGVEQGASTINQQYVKNFLLLVEADDEAEQAAAVETSIPRKLREMKMASDLEKTLSKDEILTRYLNIVPFGNGAYGVEAAARTYFGTSAAELTIPQSAMLAGIVQSSSYLNPYTNHDAVFERRNTVLGAMADAGAISPEEASAFQQEPLGVLETPQGLSNGCIGAGDRGFFCDYALQYLSEQGITQDMLAKDSYTIKLTLDPDVQDAAHNAVSSHVDPTTPGVAEVVNVIEPGENSRDILAITSSRNYGLDLDAGETMLPQATSRVGNGAGSIFKIFTAAAAIQQGAGLDTMLDVPSRYEVKGMGSGGAANCPANTYCVENAGSYAPRMTLQDALAQSPNTAFVEMIEQVGVDTVVDLSVKLGLRSYTDEGSFDGESSIADYMKDNNLGSYTLGPTAVNPLELSNVAATIASGGMWCEPNPIASVHDREGNEVYIDRPACERAIDAETASALAVGMSKDTVSGTAASAASMYGWSLPTAAKTGTTESNQSSSFMGFNSNFAAAPYIYNDGTSTTPLCSGPVRQCSSGNLFGGNEPAQTWFNMASNVPAASQGTLPSSSDSFRLGTSGELLNQVVGQSEASARRTLEAKGYKVTTRSVSGAGSARGTVVSATPQGAVLIDGGTVILNISDGTSPAPAATNNDDSDDGDTPAPSTNNRGTTIEDAINDAINQFFR GT:EXON 1|1-795:0| BL:SWS:NREP 1 BL:SWS:REP 61->633|PBPF_BACSU|8e-46|31.5|504/714| TM:NTM 1 TM:REGION 12->34| SEG 10->26|lvastvaagvlgalalv| SEG 144->157|veaddeaeqaaave| BL:PDB:NREP 1 BL:PDB:REP 61->678|3dwkB|7e-32|28.7|561/621| RP:PDB:NREP 1 RP:PDB:REP 56->668|3dwkB|3e-79|24.2|558/621| RP:PFM:NREP 2 RP:PFM:REP 69->252|PF00912|1e-43|51.7|172/178|Transgly| RP:PFM:REP 393->632|PF00905|1e-17|37.3|220/289|Transpeptidase| HM:PFM:NREP 3 HM:PFM:REP 67->252|PF00912|6e-62|50.0|174/178|Transgly| HM:PFM:REP 360->619|PF00905|6.5e-24|27.2|243/304|Transpeptidase| HM:PFM:REP 695->750|PF03793|6.7e-09|35.7|56/63|PASTA| GO:PFM:NREP 5 GO:PFM GO:0003824|"GO:catalytic activity"|PF00912|IPR001264| GO:PFM GO:0009252|"GO:peptidoglycan biosynthetic process"|PF00912|IPR001264| GO:PFM GO:0009274|"GO:peptidoglycan-based cell wall"|PF00912|IPR001264| GO:PFM GO:0008658|"GO:penicillin binding"|PF00905|IPR001460| GO:PFM GO:0009273|"GO:peptidoglycan-based cell wall biogenesis"|PF00905|IPR001460| RP:SCP:NREP 3 RP:SCP:REP 56->271|2oluA1|9e-64|34.8|187/208|d.2.1.10| RP:SCP:REP 292->668|2c5wB1|1e-32|19.8|348/385|e.3.1.1| RP:SCP:REP 695->750|1k25A1|2e-04|18.0|50/61|d.11.1.1| HM:SCP:REP 234->673|2bg1A1|3.6e-69|33.4|344/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 2555 OP:NHOMOORG 837 OP:PATTERN -------------------------------------------------------------------- 333-322333332333322-23223522222345555765235532324334232122116533444757532333331131411111334214111--23443236515---------------2222212222222233---215333333223312122243224673111-11111-11232111124346666666666666665444446673434433322222443333333333333333333332223322323222233322222333333333333333333333333333333333333343333333331222311111213231211122231311322213243232521333212144-766422222544655545554544444444445-7787887765415555666666674534424343443351111111111112335------------2122122211112----1332524444468878656665664566663675467771222233444463442333222232222222222222453532133112222133333333334434434122131111121211111111111122443233322233444333233332322322--11213-1-11144333434444444444-4444444444444344444444334444444444444444443443332343143444444444411131111111113542433332313332322423333333333333334335444443444---------122242222233222444444433334441-135566661111111121--------------------------1-11111111--3 -------------1-----------------------------------------------------------------------------------------------------------------------------------------------------1--------------11-----1--3--1--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 710 STR:RPRED 89.3 SQ:SECSTR ###################################################cccccccEEEEcTTccEEEEEcccccccccGGGccHHHHHHHHHHHccccTTcccccHHHHHHTTTTcTTccccccccccHHHHHHHHTcccccc########cccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccTTcccHHHHHHHHTccccTTccHHHHHHHHHTTccHHHHcTTTcHHHHHHHHHHHHHHHHHTTcccHHHHHHHTTcccGGGcccccTTccccccccGGGHHHHHHHHHTTcGccHHHHTTcccEEEEcccHHHHHHHHHHHHHccccccTTEEEEEEEEETTTTTccEEEEEccTTccTTTcccTTTccEEcGccGcGcGGGGHHHHTHHHHHHcccTTcEEEccccccccccTTGGGGGccccccccccTTccccEEEHHHHHHTTcHHHHHHHHHHHHHHccTTHHHHHHHHTTccccHHHcccTTcccccccHHHHTTcTTcEEcHHHHHHHHHHHTTTcEEEccccEEEEEcccccEEEEccccEEEcccHHHHHHHHHHHHTTccTTcTTTTccccccTcccEEEEEEEEccTTHHEEEEcccEEEEEEEEEccccccEEEccGGGTTcEEHHHHHTHHHHHHHHHHHHHccccccccccccTTccccEEE###########EEEEEccTTccEEEEEEEcccccccTTccHHHHHHHTTTEEEEEEEEEEcccHHHHHHHHHHHHHHHccHHHHHHHTccT############### DISOP:02AL 1-1,719-783| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccccEEEEEccccEEEEEccccEEEEcHHHccHHHHHHHHHHHHcccHHcccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHccEEEccccHHHHHHHHHHHHcccHHHccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHccHHHccccccEEEEEEcHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccEEEEEEccccccccccccccHHHHHHHcccccccccHHHHHHHHHHHcccccccEEEcccEEEEcccccccccccccccEEEccccccccEEEHHHHHHHccHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccccccccccEEEcccccccHHHHHHHHHHHHcccEEEccEEEEEEEcccccEEEcccccccccccHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEccccccEEEEEEcccEEEEEEEEcccccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHc //