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Corynebacterium glutamicum R (cglu2)
Gene : BAF53346.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  244/915 : Eukaryota  27/199 : Viruses  0/175   --->[See Alignment]
b.47.1
:398 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   219->356 1l1jA PDBj 7e-11 35.3 %
:RPS:PDB   197->370 1a1rB PDBj 3e-14 15.4 %
:RPS:SCOP  217->383 1qy6A  b.47.1.1 * 6e-17 25.6 %
:HMM:SCOP  188->385 1l1jA_ b.47.1.1 * 1.6e-33 27.6 %
:HMM:PFM   8->150 PF02674 * Colicin_V 5.4e-18 24.1 141/146  
:HMM:PFM   217->363 PF00089 * Trypsin 3.7e-12 22.9 144/219  
:BLT:SWISS 220->356 DEGP_CHLPN 1e-11 36.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53346.1 GT:GENE BAF53346.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 415286..416482 GB:FROM 415286 GB:TO 416482 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53346.1 LENGTH 398 SQ:AASEQ MLSPSLVVDAVIVLVMAFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTALRFLLAIGTVVLLVGLGNLIGAHLGAAIRDNIKFRSSRTLDSGLGAIFQVLATLIVVWLVAIPLATGLPGTVASGIRDSRILGFVDKYTPQGLDTLPSKIAAMLSESGLPPLISPFTGGSSVEVDAPEINVTNVDLVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGTSTVSLDTMIGTRSAEVVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSGPFNASPARVRERIMITGSNIYANGQHEREAYSVRGSIQSGNSGGPMANEMGEVVGVVFGAAIDGSDTGYVLTAEEVQERIGDITSLTQPVDTMQCAVS GT:EXON 1|1-398:0| BL:SWS:NREP 1 BL:SWS:REP 220->356|DEGP_CHLPN|1e-11|36.4|132/488| TM:NTM 4 TM:REGION 1->22| TM:REGION 30->52| TM:REGION 64->86| TM:REGION 107->129| SEG 30->49|tsllstvgvvsglvvgaaaa| SEG 64->82|llaigtvvllvglgnliga| BL:PDB:NREP 1 BL:PDB:REP 219->356|1l1jA|7e-11|35.3|133/226| RP:PDB:NREP 1 RP:PDB:REP 197->370|1a1rB|3e-14|15.4|149/179| HM:PFM:NREP 2 HM:PFM:REP 8->150|PF02674|5.4e-18|24.1|141/146|Colicin_V| HM:PFM:REP 217->363|PF00089|3.7e-12|22.9|144/219|Trypsin| RP:SCP:NREP 1 RP:SCP:REP 217->383|1qy6A|6e-17|25.6|156/216|b.47.1.1| HM:SCP:REP 188->385|1l1jA_|1.6e-33|27.6|196/228|b.47.1.1|1/1|Trypsin-like serine proteases| OP:NHOMO 321 OP:NHOMOORG 276 OP:PATTERN --1-------------11----------1--------------------------------------1 -1-1111111111111111-1111211111121222111121111----111111111--33211212212---------1-2-------1--------------1------1--1-1-11111--11--111-2-1---111---2111222-------112-1-1---------11-1--1111--11-1--11111111-111111--111-111---1---------------------------------------------------------------------------------------------------------1-------1-111--1111-11--1----11-1--2-11--1-1---2----1-----221----------------------1111111--2------1111----11---1-11111112--------1----11---------------------------------1------1--------------1--------1---1--111---1---------------------------1--11--121-----1122221--111111121---------------------1--------1--1--------------------1------------------------------------------------------------------------------------------------------1------------1--111------------------221-1-------------------------------11111---111111111111--------11----------------------------------------1-----1----1- ----111--------------------------------1--------------------------------------------------------------------2--------------------131-1-------------------------1-------------1--111-111211112-24--1---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 191 STR:RPRED 48.0 SQ:SECSTR ##################################################################################################################################################################################################HHHHHHHccccccccccEEEEEccccEEEEEEETEEEEEHHHHTTccEEEHcHHHTTEEEcccEEETTTTEEEETEEEEEccTTccccccccccccEEEEEcTTccEEEETTTTTEEccTTEEEEEEEEEcEEEEHccccHHHHTTcTTcEEEcTTccEEEEEEEEEEETTEEEEEEEHHHHTTTcccTcc############# DISOP:02AL 1-2,160-191,208-221| PSIPRED cccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHccccHHHHHHHHHcccccccccccHHHHHHcccccHHHcccccccccccccccccccHHHHHHHHHccEEEEEEccccccccEEEEEEEEEccEEEEcHHHcccccEEEEEEccccEEEEEEEEcccccEEEEEEccccccEEEEcccccccccEEEEEEcccccccccccEEEEEEEEEccccccccccccEEEEEEEEcccccccccEEEcccccEEEEEEEccccccccEEEEcHHHHHHHHHHHHHccEEEccEEEEcc //