[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF53359.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  902/915 : Eukaryota  167/199 : Viruses  1/175   --->[See Alignment]
e.10.1
:1004 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->626 1cy7A PDBj 2e-99 43.8 %
:RPS:PDB   16->605 1cy2A PDBj e-147 42.5 %
:RPS:SCOP  18->605 1d6mA  e.10.1.1 * e-132 23.2 %
:HMM:SCOP  15->605 1mw9X_ e.10.1.1 * 7.6e-174 48.3 %
:RPS:PFM   18->130 PF01751 * Toprim 2e-05 35.6 %
:RPS:PFM   153->602 PF01131 * Topoisom_bac 3e-85 51.6 %
:RPS:PFM   775->829 PF00920 * ILVD_EDD 3e-04 41.8 %
:HMM:PFM   154->601 PF01131 * Topoisom_bac 2.7e-121 43.4 392/404  
:HMM:PFM   17->136 PF01751 * Toprim 1.9e-27 48.4 93/96  
:HMM:PFM   946->1003 PF07382 * HC2 3.9e-06 44.8 58/194  
:BLT:SWISS 18->932 TOP1_MYCLE 0.0 63.5 %
:PROS 330->344|PS00396|TOPOISOMERASE_I_PROK
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53359.1 GT:GENE BAF53359.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 428027..431041 GB:FROM 428027 GB:TO 431041 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53359.1 LENGTH 1004 SQ:AASEQ MADTAGTTGTAGSKKKYLVIVESATKAKKIQPYLGNDYIVEASVGHIRDLPRGAADIPAKYKKEPWARLGVDTDRGFAPLYVVSPDKKKKVADLKAKLKLVDELLLATDPDREGEAIAWHLLEVLKPTVPVRRMVFNEITKPAILAAAENTRELDENLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVATRVIVERERERMAFVSADYWDLSAEFNAGESGKADSDNPSSFTARLSTIDGNRVAQGRDFNDRGELTSEAVVVDKQRAEALAEALEGQEMAVVGVEEKPYTRRPYAPFMTSTLQQESGRKLHYTSERTMRIAQRLYENGHITYMRTDSTSLSEQGMKAARDQALELYGAEYVSPSPRTYDRKVKNSQEAHEAIRPAGETFATPGQLHGQLDAEEFKLYELIWQRTVASQMADAKGTSMKVTIGGTAKTGEKTEFNATGRTLTFPGFLRAYVETTRTADGRDVADNAEKRLPLLSEGDLLKVLGIEADGHSTNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDRGYVYSRGNALVPSWVAFAVVGLLEANFTSLVDYDFTSSMEDELDNIAAGREGRTEWLNGFYFGDAEADQSMAESVARQGGLKALVDANLEHIDARSVNSLKLFDDAEGRAVNVRVGRYGPYIERIVGTTAEGEPEFQRANLPEETTPDELTLEVAEKLFATPQGGRELGINPANGRMVVAKEGRFGPYVIEQVTDSERAGAEAQAEEVVAAERKAEDEQRAADGMRPKNWETKTAANQKEKRINQLVEENLKPATASLFSGMEPATVTLEEALKLLSLPREVGVDPSDNEVITAQNGRYGPYLKKGSDSRSLNSEEQIFTVTLDEARRIYAEPKRRGRAAAQPPLKQLGDNDVSGKPMTVKDGRFGPYVTDGTTNASLRKGDVPESLTDARANELLSERRAKEAADGGAPAKKTSTKKTAAKKTTAKKTTAKKTTAKKTVRKAPPKTTKNVVKAGARKKS GT:EXON 1|1-1004:0| BL:SWS:NREP 1 BL:SWS:REP 18->932|TOP1_MYCLE|0.0|63.5|873/947| PROS 330->344|PS00396|TOPOISOMERASE_I_PROK|PDOC00333| SEG 2->12|adtagttgtag| SEG 86->107|dkkkkvadlkaklklvdellla| SEG 275->283|aealaeale| SEG 685->697|lpeettpdeltle| SEG 741->762|eragaeaqaeevvaaerkaede| SEG 953->993|apakktstkktaakkttakkttakkttakktvrkappkttk| BL:PDB:NREP 1 BL:PDB:REP 16->626|1cy7A|2e-99|43.8|548/563| RP:PDB:NREP 1 RP:PDB:REP 16->605|1cy2A|e-147|42.5|529/557| RP:PFM:NREP 3 RP:PFM:REP 18->130|PF01751|2e-05|35.6|101/110|Toprim| RP:PFM:REP 153->602|PF01131|3e-85|51.6|403/407|Topoisom_bac| RP:PFM:REP 775->829|PF00920|3e-04|41.8|55/521|ILVD_EDD| HM:PFM:NREP 3 HM:PFM:REP 154->601|PF01131|2.7e-121|43.4|392/404|Topoisom_bac| HM:PFM:REP 17->136|PF01751|1.9e-27|48.4|93/96|Toprim| HM:PFM:REP 946->1003|PF07382|3.9e-06|44.8|58/194|HC2| GO:PFM:NREP 6 GO:PFM GO:0003677|"GO:DNA binding"|PF01131|IPR013497| GO:PFM GO:0003916|"GO:DNA topoisomerase activity"|PF01131|IPR013497| GO:PFM GO:0005694|"GO:chromosome"|PF01131|IPR013497| GO:PFM GO:0006265|"GO:DNA topological change"|PF01131|IPR013497| GO:PFM GO:0003824|"GO:catalytic activity"|PF00920|IPR000581| GO:PFM GO:0008152|"GO:metabolic process"|PF00920|IPR000581| RP:SCP:NREP 1 RP:SCP:REP 18->605|1d6mA|e-132|23.2|544/603|e.10.1.1| HM:SCP:REP 15->605|1mw9X_|7.6e-174|48.3|551/0|e.10.1.1|1/1|Prokaryotic type I DNA topoisomerase| OP:NHOMO 1694 OP:NHOMOORG 1136 OP:PATTERN 333333323333333322222222111111111112211111111111122112222222211123-- 1121111111111111111-11111111111111111111111111111111111111111111111111111111111111231322443312331--1121112221211111111111111111111111111111111111132321111111111111111222211111111111111111222112233333333333334332222233313322121222223231111111121111122112311111211111111111211121111141122111111111111111111111121111111111111122333222222232326112222122231112133341211121122111111111111111111111112111111111111111-11112113112111111111111111111111111111111111111111111111111111111111111111111111111111111111115111112211111111111111152121211111132512111112111112111211111121411112111221122221111111111111111111111111211111132121111221331321322121122121121111111221121-111121--11122223221111111111-2111111122111111111223322343122322232332322412111121-222222222422--1111111111111122222222122222322211211111121122222331223322331111111111131211111322221121422111411211211111111111111111111111-111-1111111111111112112121222121 11-111--633-111111-1111111122111-2-1-------11111111111111-1111-11111111-11111--111111-11-12111-111111-1212111141211212-1122-63-318H2-3221--122221-111121-42322124B2321-111321222222G2112342141333121111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 646 STR:RPRED 64.3 SQ:SECSTR ##############ccEEEEEccHHHHHHHHTTccTTEEEEEcccccEEcccHHHHcGccccHHHHHHHTEETTTTTEEccEEcTTcHHHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHcccGGEEEcccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTccccTTHHHHHHHHHHHHHHHHTccccEEEEEEEEEEccTcEEEEcTTccEEEEEEEEETTEEccccTTccEEcccccHHHcccHHHHHHHHHHHHHccEEEEEEEEEEEEEcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHTTcccccccccccccHHHHHHHHHHHHHHTcGGGccccccccccccccccccccccccccTTcccGGGcTTcccHHHHHHHHHHHHHHHHHTcccEEEEEEEEEEcccccEETTEEEEEEEEEEEEcGGGGGccccccccTHHccccccccccccccTTcEEEEEEEEEEEEEccccccccHHHHHHHHHHTTcccTTTHHHHHHHTTTTTcEEEccccEEEcHHHHHHHHHHHHHcHHHHcHHHHHHHHHHHHHHHTTcccHHHHHHHHHEEGGccccccccTTTTccccccccGGGT#cccEEEEEEEEEccccccEEEEEEEEE####################################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-18,296-299,371-385,505-505,876-890,942-1005| PSIPRED cccHHHHccccccccEEEEEEccHHHHHHHHHHHccccEEEEEEccEEEcccccccccHHHccccHHHcccccccccccccEEcccHHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccEEEEEEEEEcccccccccccccEEEEEEEEEcccEEccccccccccccccccccccHHHHHHHHHHHccccEEEEEEEEEEEEccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccccccEEEEEEccEEEEccHHHHccccccccccccccccccccccccccccEEEEEEEEEEcccccccccccHHHHHHHHHHcccccccccHHHHHHHHHcccEEEEccEEEEcHHHHHHHHHHHHHccHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccccccccccccccEEEEccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHccccccEEccccccccEEEEEEccccccEEEccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccHHHccHHHHHHHHcccHHHccccccccEEEEEEcccccEEEEccEEEEcccccccccccHHHHHHHHHHHHHcccccccHHHHHcccccccccEEEEEccccccEEEEccEEEEccccccHHHccHHHHHHHHHHHHccccccccccccccccccccccEEEEcccccccccHHHHHHHccccHHHHHHHHHccccc //